Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 317 a.a., Alkanesulfonates-binding protein from Sphingobium sp. HT1-2

 Score =  142 bits (357), Expect = 1e-38
 Identities = 102/316 (32%), Positives = 156/316 (49%), Gaps = 17/316 (5%)

Query: 12  RRLLIGGLLASVASALLPWSEAIADDARTLRIGYQKFNSINILKGSGALEKALAPQGVKV 71
           + +LI G+L + A      ++   +    LR+  QK     ++  SGAL+ A      KV
Sbjct: 5   KSILIVGVLIASAGVAFAVTQYRTEQVPVLRVANQKGQVKAMMLASGALDGA----SYKV 60

Query: 72  SWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQP---YPRGIGLVV 128
            W EF A   LLEA+  GA DLG AADAP +FA  +G PV  +A + P       + ++V
Sbjct: 61  EWSEFPAAQPLLEAVGGGAADLGLAADAPFIFAYQSGSPVKAIAVQAPANQAAEALAILV 120

Query: 129 REQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQS 188
           +    + S QDL G+ +AT RG    +LL  AL++A +    +   ++    DA AA  S
Sbjct: 121 KNGSPIRSAQDLVGRTIATTRGSIGHHLLLQALERAHIPADKVKVTFL-PPGDAKAAFDS 179

Query: 189 GSVQAVTLWDPF--LAAAESQPGLKNLRDGSGLSNNRTFYLSTASFAD--QHRALLKTFF 244
           GS+ A + W P+  +A  E      + RD  GL      Y+  A  A     RALL  F 
Sbjct: 180 GSIDAWSTWTPYTNVAVKEGARAAVDARD-YGL----PLYIDIAHDASIAPKRALLADFL 234

Query: 245 AELGKVSQWANAKPAEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADT 304
               K   WA A P + AA+LA + G+   +   + ER N  + ++  +++A +Q + + 
Sbjct: 235 QREAKAVAWARAHPDQFAAVLAKETGLPIDIARASFERSNRISQSVDAKVIAHEQAIVER 294

Query: 305 FQGLGLIPRKLQVAEA 320
           ++  GLI  K  VA+A
Sbjct: 295 YRRAGLIDPKRDVAQA 310