Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 318 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  211 bits (538), Expect = 1e-59
 Identities = 125/314 (39%), Positives = 187/314 (59%), Gaps = 11/314 (3%)

Query: 8   FSPLRRLLIGGLLASVASALLPWSEAIADDARTLRIGYQKFNSI-NILKGSGALEKALAP 66
           F PLR+L     LA +ASALLP   ++A   +TLRIGYQK +++  +LK  G LE+ L  
Sbjct: 3   FKPLRQLG----LALLASALLP---SLASAEQTLRIGYQKSSTLLTLLKARGTLEQRLQA 55

Query: 67  QGVKVSWHEFAAGPQLLEALSTGAIDLG-HAADAPSVFAQAAGKPVVYLAAEQPYPRGIG 125
           +G++V+WHEF +G  LLEAL+ G +DL    AD   VF QAAG  + Y A E P P    
Sbjct: 56  EGIRVTWHEFPSGLPLLEALNLGNVDLSADVADTVPVFTQAAGAKLTYFAREAPSPTAQA 115

Query: 126 LVVREQDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAA 185
           ++V     L ++ DLKGKRVA  +   + YLL  AL +AGL++KDITPAY+   AD  AA
Sbjct: 116 ILVPADSPLKTLADLKGKRVAVTKAAGSHYLLIQALAKAGLTFKDITPAYL-IPADGRAA 174

Query: 186 LQSGSVQAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFA 245
            ++  V A   WDP++A+A+ Q   + L DGS L++ + +YL+ + +A  H  +L+  + 
Sbjct: 175 FENHKVDAWVTWDPYVASAQRQQNARILVDGSELASYQRYYLAGSDYAKAHPEVLQQVYL 234

Query: 246 ELGKVSQWANAKPAEVAALLAPQLG-ISTQVLEVASERRNYNAVAITPQIVAEQQKLADT 304
            L +   W  A P   A +L P  G + +  ++ A+ RR+Y+   +    +AEQQ++AD 
Sbjct: 235 ALREAGAWTKANPEAAARILGPLWGNLDSATVQQANARRSYDVQPVKLDNLAEQQRIADA 294

Query: 305 FQGLGLIPRKLQVA 318
           F   GL+P+ +  +
Sbjct: 295 FYREGLLPKAVDTS 308