Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 312 a.a., putative Periplasmic aliphatic sulfonate-binding protein from Pseudomonas putida KT2440

 Score =  144 bits (364), Expect = 2e-39
 Identities = 91/306 (29%), Positives = 158/306 (51%), Gaps = 11/306 (3%)

Query: 23  VASALLPWSEAIADDARTLRIGYQKFNSINILKGSGALEKALAPQGVKVSWHEFAAGPQL 82
           +A+ +L  + ++A  A+TL +G Q +N+  +++ +G LE+        + W +F AG  +
Sbjct: 7   LAATVLATTFSLAAAAQTLVVGDQSYNARAVMEAAGVLEQL----PYTLEWKQFTAGSPV 62

Query: 83  LEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLVVREQDHLASVQDLKG 142
            EAL+ G++D+G   DAP +F  A G P+  +A  +    G+ ++ R+   + S+QDL+G
Sbjct: 63  AEALNVGSLDIGLLGDAPPLFLGALGAPIKVIAVSRQNLEGVAILARKDSPIHSLQDLRG 122

Query: 143 KRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQSGSVQAVTLWDPFLA 202
           KR A  +G  +Q LL  AL +AG+    +   Y+ +A DA  AL  GSV  +  W+P++ 
Sbjct: 123 KRAAIWKGSWSQQLLFSALDKAGVPRDAVELRYL-SALDASHALDGGSVDVIATWEPYVT 181

Query: 203 AAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAELGKVSQWANAKPAEVA 262
             E Q G + L    G+   ++F ++ +   +  RA +  F   L K   W  + PA   
Sbjct: 182 QQERQ-GARVLATADGVIPAQSFVVANSKAVELKRAQIADFLQRLKKARDWTLSAPANTE 240

Query: 263 ALLAPQLGISTQVLEVAS---ERRNYNAVAITPQIVAEQQKLADTFQGLGLIPRKLQVAE 319
           A       ++    ++A     R   +   + PQ++A+ QK  D F GLGLI  K   A+
Sbjct: 241 AYADAWAKLTRADRDIARAWFARARTDLAPLDPQVIADAQKTVDFFSGLGLI--KAYPAQ 298

Query: 320 AVYPAS 325
           +++  S
Sbjct: 299 SLFDTS 304