Pairwise Alignments

Query, 328 a.a., putative ABC transporter, periplasmic substrate-binding protein from Pseudomonas putida KT2440

Subject, 321 a.a., aliphatic sulfonate ABC transporter - periplasmic binding protein / transport of isethionate from Pseudomonas putida KT2440

 Score =  269 bits (688), Expect = 6e-77
 Identities = 144/318 (45%), Positives = 199/318 (62%), Gaps = 8/318 (2%)

Query: 11  LRRLLIGGLLASVASALLPWSEAIADDARTLRIGYQKFNSINILKGSGALEKALAPQGVK 70
           LRR L+    A+V+   +  ++A      +LRIGYQK+ ++ +LK  G LEK LA QGV+
Sbjct: 6   LRRGLVALFAAAVSFGAITQAQA-----ESLRIGYQKYGTLVLLKAKGTLEKRLAEQGVQ 60

Query: 71  VSWHEFAAGPQLLEALSTGAIDLGHAADAPSVFAQAAGKPVVYLAAEQPYPRGIGLVVRE 130
           V W EF  GPQLLE L+ G+ID G   + P VFAQAAG  ++Y+A E P P    ++V +
Sbjct: 61  VQWTEFPGGPQLLEGLNVGSIDFGVTGETPPVFAQAAGADLLYVAYEPPAPHSEAILVPK 120

Query: 131 QDHLASVQDLKGKRVATGRGWNAQYLLAVALQQAGLSYKDITPAYVNNAADAVAALQSGS 190
              + SV+DLKGK+V   +G N  YLL  AL+ AGL Y DI P Y+   ADA AA + GS
Sbjct: 121 GSPIQSVKDLKGKKVVLNKGSNVHYLLVRALEDAGLKYSDIQPVYL-PPADARAAFERGS 179

Query: 191 VQAVTLWDPFLAAAESQPGLKNLRDGSGLSNNRTFYLSTASFADQHRALLKTFFAELGKV 250
           V A  +WDP+ AAAE Q   + LRDG GL +N  FYL+T ++A QH A++ T   E+  V
Sbjct: 180 VDAWVIWDPYQAAAEQQLQARTLRDGKGLVDNHQFYLATRNYATQHPAVINTVIEEVRAV 239

Query: 251 SQWANAKPAEVAALLAPQLGISTQVLEVASERRNYNAVAITPQIVAEQQKLADTFQGLGL 310
            +W+ A P EV   +AP LG+   +   + +R+ Y A  +TP++VA QQK+ADTFQ L L
Sbjct: 240 GEWSQANPQEVTDQVAPLLGLPAGITLTSVKRQGYGAAPLTPEVVAAQQKIADTFQALKL 299

Query: 311 IPRKLQVAEAVY--PASV 326
           IP+ L + + ++  PA V
Sbjct: 300 IPKPLSIKDVIWTPPAKV 317