Pairwise Alignments

Query, 227 a.a., Transcriptional regulator, TetR family from Pseudomonas putida KT2440

Subject, 227 a.a., HTH-type transcriptional repressor NicS from Xanthobacter sp. DMC5

 Score =  149 bits (376), Expect = 4e-41
 Identities = 80/206 (38%), Positives = 122/206 (59%)

Query: 17  RKTRKNNPEKTREDILQAAINEFVQQGLAGARVDAIAERTATSKRMIYYYFGSKEQLYCE 76
           R+    + +KTR +IL+AA  EF  +GLAGARVD +AE    +KRMIYYYFGSKE LY  
Sbjct: 20  REAATRDADKTRLNILEAAEAEFAAKGLAGARVDVVAEEAGANKRMIYYYFGSKEDLYLA 79

Query: 77  CLVKLYGDIRKTEQSLDLESLPAEQAIRRLVEFTFDHHDRNVDFVRIICTENIHYGEYVK 136
            L ++Y D+R  E  L LE++   +AI  L EF FD+  ++   + ++ +EN+  GEY++
Sbjct: 80  VLERVYTDMRIAEAELALEAMAPLEAITCLTEFKFDYPAQHPHLIPLLNSENLLGGEYLR 139

Query: 137 QSPAIREMSSLVLEALGNTLRRGVQEGVFRAGIEVIDLHMLMSSFCFYRVSNRHTFGEIF 196
           +S  +REM   ++  L   L RG  +G  RAGI+ + L++ +S+  ++  SN  T    F
Sbjct: 140 RSLRLREMQISLIARLEAILARGAADGTLRAGIDPLHLYLTISAVSYFYFSNNPTLSTAF 199

Query: 197 QIDLSDEQIKLRHKAMICDAVLRYIQ 222
             DL+    +   +  + D V RYI+
Sbjct: 200 GRDLATPDERAARRRHVVDVVTRYIE 225