Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 321 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 84.0 bits (206), Expect = 5e-21
 Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 14/296 (4%)

Query: 46  TVAMDVLVTAN--LLRADSFQFTPLSLDGDRVLSDLGLELVATELSAAALKELDLLVVCG 103
           T  +DV   AN  L   D +Q   + L    + +  GL L A    + AL+  DLL+V G
Sbjct: 19  TGPLDVFCEANRFLSPQDHYQLDVIGLGHGSMAASNGLSLQAHRHYSEALQAYDLLLVAG 78

Query: 104 GLRTPLKY--PELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSE 161
           G + P +    E D  L    A     G + NGA+ L RAG+LD    + H    A L+ 
Sbjct: 79  GPQLPFEDFGAEFDDWLRSATARAQRFGSICNGAFMLARAGLLDGKTVTTHWNDAADLAR 138

Query: 162 RSPQTRI-TPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEILSF----SG 216
             P  ++     +  D +  ++A     ++L L L+ + +G  +A  V + L      SG
Sbjct: 139 LCPTAQVDADRLYVQDGNLYTSAGVTAGIDLSLYLLAQDHGPEVALSVAKRLVVFTQRSG 198

Query: 217 ARYRQ---VGPGAKKSMSLHLRTIVELMENNLEETLSLDQLAAYSGRSRRQIDRLFQAQL 273
            + +    + P A+ + ++ L  +  L   NL   L++  LA  +  S R   R+F  + 
Sbjct: 199 GQSQFSPFLTPHAETTSAVALVQLYVLA--NLTGDLTIADLAKAANMSARNFSRVFAREA 256

Query: 274 GTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYAAYFGYPPSR 329
             +P  +    R+  +R +L+ S   +  VA  CGF    H    +    G  P +
Sbjct: 257 RITPAEFVERARVDAARVMLESSRAPLKTVAYQCGFRDAQHMRSVFNRRLGVTPQQ 312