Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 367 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  207 bits (526), Expect = 4e-58
 Identities = 126/324 (38%), Positives = 190/324 (58%), Gaps = 15/324 (4%)

Query: 22  SGANAQ--APYRVDFILLEHFSMASFTVAMDVLVTANLLRA-DSFQFTPLSLDGDRVLSD 78
           SGA  Q  AP  + F+LL++F++ S   A++ L  AN L   + +++T LS+DG++V + 
Sbjct: 6   SGAQPQNRAPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWTTLSVDGNQVWAS 65

Query: 79  LGLELVATELSAAALKELDLLVVCGGL---RTPLKYPELDRLLNDCAAHGMALGGLWNGA 135
            GL+ +  + S      LD ++VCGG+   RT  +  E    L   A     LG +  G+
Sbjct: 66  DGLQ-ITPDASMHKAPALDTVIVCGGVGIQRTVTR--EHVSWLQSQARQSRRLGAVCTGS 122

Query: 136 WFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGL 195
           W L  AG+LD + CS+H E  AS+ E  P+  ++   FTLDR+R +++     +++ML L
Sbjct: 123 WALACAGLLDGFDCSVHWECLASMQEAFPRVAMSTRLFTLDRNRFTSSGGTAPLDMMLHL 182

Query: 196 VRRLYGDGLAEGVEEILSFSGARYRQVGPGAKKSMSL-----HLRTIVELMENNLEETLS 250
           + R +G  L+  + E+  +   R  Q          L      L+ IV LME NLEE + 
Sbjct: 183 ISRDHGRELSAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPID 242

Query: 251 LDQLAAYSGRSRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFV 310
           LD+LA Y   SRRQ++RLFQ  L  SP RYY++LR+ ++R+LL+ + +S++EVA  CGFV
Sbjct: 243 LDELAVYVAVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFV 302

Query: 311 SVSHFSKCYAAYFGYPPSREQRLG 334
           S  HFSKCY  YFG PP R++R+G
Sbjct: 303 STPHFSKCYREYFGIPP-RDERVG 325