Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 326 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  130 bits (326), Expect = 6e-35
 Identities = 81/224 (36%), Positives = 121/224 (54%), Gaps = 6/224 (2%)

Query: 114 LDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASF 173
           L   L      G  +GGL  G + L + G+LD Y  ++H   +   +ER P+   T   F
Sbjct: 85  LSTALKQLVRAGCVIGGLSAGVYPLAQLGLLDGYRAAVHWRWQDDFAERFPKVIATSHLF 144

Query: 174 TLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEILSFSGARY---RQVGPGAKKSM 230
             DRDRL+A      ++L+L ++ R +G  LA  V E L     R    RQ  P   +  
Sbjct: 145 DWDRDRLTACGGMSVLDLLLAVLARDHGAELAGAVSEELVVERIREGGERQRIPLQNRLG 204

Query: 231 SLH--LRTIVELMENNLEETLSLDQLAAYSGRSRRQIDRLFQAQLGTSPRRYYMELRITK 288
           S H  L   V LME N+EE L+ D++A +   SRRQ++R+F+  L   P +YY+ELR+ K
Sbjct: 205 SSHPKLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNK 264

Query: 289 SRRLLQYSDLSVMEVAVACGFVSVSHFSKCYAAYFGYPPSREQR 332
           +R++L  +  S++++ ++CGF S  HFS  Y  +FG  P RE R
Sbjct: 265 ARQMLMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATP-REDR 307