Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 316 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 79.3 bits (194), Expect = 1e-19
 Identities = 80/308 (25%), Positives = 140/308 (45%), Gaps = 19/308 (6%)

Query: 33  DFILLEHFSMASFTVAMDVLVTAN--LLRADSFQFTPLSLDGDRVLSDLGLELVATELSA 90
           DF+LL+   MA     ++V   AN  L  A+ ++   L  +   + +  G+ +    L  
Sbjct: 11  DFLLLD---MAG---PLEVFSIANRYLPAAEHYRILTLGTEPGPLRASNGVAVQTDLLLD 64

Query: 91  AALKELDLLVVCGGLRTPLK-YPELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGC 149
            A    DLL+V GG     + +P L   L   A      G +  GA+ LG AG+LD++  
Sbjct: 65  QAQDAYDLLLVPGGPGAYNECHPALLPWLKAAAPRARRFGSICTGAFVLGHAGLLDNHRV 124

Query: 150 SIHPEQRASLSERSPQTRITPASFTLDRDRL-SAASPNGAMELMLGLVRRLYGDGLAEGV 208
           + H      L +  P+  +      L   RL ++      ++L L +V + +G  +A  V
Sbjct: 125 TTHWHYTERLIKAFPKAIVETDRIYLQDGRLITSGGVTAGIDLALSVVAQDHGKQVAVDV 184

Query: 209 EEILSFSGARYRQVGPGAKKSMSLHL---RTIVELMENNLEETL----SLDQLAAYSGRS 261
            ++L       RQ G      M+  +    T +  ++N++ E L    +++ +AA +G S
Sbjct: 185 AKVLLV--VMKRQGGQAQFSPMTAAVAPQETAITRVQNHVLEHLCEPFTIESMAALAGMS 242

Query: 262 RRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYAA 321
            R   RLF  ++  +P  +    RI ++R+LL+ +DL +  VA   GF SV H    ++ 
Sbjct: 243 ARHFARLFAKEVQMTPMAFLQGARIDRARQLLETTDLPLKTVAFHAGFGSVRHMRFLFSE 302

Query: 322 YFGYPPSR 329
             G  P++
Sbjct: 303 KLGLNPTQ 310