Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 335 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  343 bits (880), Expect = 4e-99
 Identities = 177/331 (53%), Positives = 232/331 (70%), Gaps = 3/331 (0%)

Query: 5   RQFSQKTSTSNMLRLKTSGANAQAPYRVDFILLEHFSMASFTVAMDVLVTANLLRADSFQ 64
           RQFS      N+  L  +   A    RV F+LLEHFS+ +FT  +D  VTANLLR D F 
Sbjct: 4   RQFSGGMKGKNLRYLNETSQPASVA-RVGFLLLEHFSLPAFTQTLDTFVTANLLRPDLFA 62

Query: 65  FTPLSLDGDRVLSDLGLELVA-TELSAAALKELDLLVVCGGLRTPLKYPE-LDRLLNDCA 122
                 D   V+SDLGL +     +  AAL++L+LLV+CGG RT LK  E    LL   A
Sbjct: 63  SRTFGCDDGEVISDLGLVIRPDARIDVAALQDLELLVICGGFRTELKASEDFIHLLRGAA 122

Query: 123 AHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSA 182
             G++L GLWNGAWFLGRAG+L  Y C+IHPE R +L E S  T +T   + +DRDRL+A
Sbjct: 123 EQGISLAGLWNGAWFLGRAGLLQGYRCAIHPEHRPALGEVSKATHVTSEPYVIDRDRLTA 182

Query: 183 ASPNGAMELMLGLVRRLYGDGLAEGVEEILSFSGARYRQVGPGAKKSMSLHLRTIVELME 242
           +SP+GA  + L  ++ L+G  L EG+E+IL+F  +RYR++ P    S+S  LR +V+LM+
Sbjct: 183 SSPSGAFHMALDWIKGLHGKALVEGIEDILAFEESRYRRIKPTENVSVSAPLREVVKLMD 242

Query: 243 NNLEETLSLDQLAAYSGRSRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVME 302
            NLEE L LDQLA Y+GRSRRQ++RLF+ QLGT+P+RYYMELR+T++RRLLQ+++LS +E
Sbjct: 243 ANLEEPLELDQLAVYAGRSRRQLERLFKEQLGTTPQRYYMELRVTEARRLLQHTELSQVE 302

Query: 303 VAVACGFVSVSHFSKCYAAYFGYPPSREQRL 333
           V VACGFVS SHFSKCY++YFGY PS+E+RL
Sbjct: 303 VLVACGFVSPSHFSKCYSSYFGYRPSKEKRL 333