Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 358 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  201 bits (512), Expect = 2e-56
 Identities = 116/307 (37%), Positives = 182/307 (59%), Gaps = 8/307 (2%)

Query: 34  FILLEHFSMASFTVAMDVLVTANLLRADS-FQFTPLSLDGDRVLSDLGLELVATELSAAA 92
           F+LL+ F++ S   A++ L  AN L     +++   S DG+ V +  G+  +  E S  +
Sbjct: 11  FLLLDQFTLMSLASAVEPLRMANQLSGQELYKWHTASSDGNPVWASDGVP-ITPEGSIFS 69

Query: 93  LKELDLLVVCGGLRTPLKYP-ELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSI 151
           +   D+++VCGG+        EL + L   A +   LGG+  G++ L RAG+LD Y CS+
Sbjct: 70  VPPADIVIVCGGIGIQGTVTGELVKWLRGQARYAKRLGGICTGSFVLARAGLLDGYECSV 129

Query: 152 HPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEI 211
           H E  A++ E  P+  ++ + F+LDRDRL+++     +++ML L+ R +G  L+  + ++
Sbjct: 130 HWEWLAAMQEAFPRVTVSSSLFSLDRDRLTSSGGTAPLDMMLHLIGRDHGHELSAAISDM 189

Query: 212 LSFSGARYRQVGPGAKKSMSL-----HLRTIVELMENNLEETLSLDQLAAYSGRSRRQID 266
             +   R  Q          L      L+ IV LME NLEE ++LD+LAAY   SRRQ++
Sbjct: 190 FVYERIRNEQDHQRVPLKHMLGTQQPKLQEIVALMEANLEEPINLDELAAYVALSRRQLE 249

Query: 267 RLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYAAYFGYP 326
           R+FQ  L  SP RYY+ LR+ ++R+LL+ + +S++E+AV CGFVS  HFSKCY  YFG P
Sbjct: 250 RMFQKYLHCSPSRYYLRLRLIRARQLLKQTPISIVELAVLCGFVSTPHFSKCYREYFGVP 309

Query: 327 PSREQRL 333
           PS E+ +
Sbjct: 310 PSDERSI 316