Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 328 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  103 bits (258), Expect = 5e-27
 Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 13/309 (4%)

Query: 32  VDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSL-DGDRVL-SDLGLELVATELS 89
           V  +L     +   T  MD    AN     + Q+  L+L +G  V+    GL++VA    
Sbjct: 10  VAMVLFNDVLLLDVTGPMDAFAIANRFLPAARQYRLLTLAEGQAVVRGSCGLKVVADRRL 69

Query: 90  AAALKELDLLVVCGGLRT-PLKYPELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYG 148
               + +DLL+V GG     +  P ++R L          G +  G + LGRAG+L+ Y 
Sbjct: 70  EDLPEAVDLLLVPGGPGAYDIALPGIERWLPKAVRQAKRFGAICTGVFLLGRAGLLNGYR 129

Query: 149 CSIHPEQRASLSERSPQTRI-TPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEG 207
           C+ H      L++  P+ ++ T   + +DR  +++      ++L L +V   +G  LA  
Sbjct: 130 CTTHWNYVERLAQAFPEAKVETEQIYVMDRCLITSGGITAGIDLALAVVAEDHGKALALE 189

Query: 208 VEEILSFSGARYRQVGP-------GAKKSMSLHLRTIVELMENNLEETLSLDQLAAYSGR 260
           V ++L    AR+RQ G         A       +  +   + +++E+  ++ ++A     
Sbjct: 190 VAKVLLV--ARHRQGGQTPYGPLLAAVPRDDSPIARVQAYIVDHIEQAFTVQKMAELVAM 247

Query: 261 SRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYA 320
           S R   R F  ++G +P +Y    RI ++R+LL+  DL +  VA  CGF S  H  K + 
Sbjct: 248 SGRNFARTFLREVGITPLQYLQNARIDRTRKLLECGDLPMKVVAAQCGFGSDRHMRKVFF 307

Query: 321 AYFGYPPSR 329
              G  P++
Sbjct: 308 ERIGMTPAQ 316