Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  129 bits (323), Expect = 1e-34
 Identities = 81/220 (36%), Positives = 119/220 (54%), Gaps = 6/220 (2%)

Query: 118 LNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSIHPEQRASLSERSPQTRITPASFTLDR 177
           L   A  G  +GGL  G + L   G+LD Y  ++H   +   +ER P+   T   F  DR
Sbjct: 89  LKQLARSGCLIGGLSAGVYPLAMLGLLDGYRAAVHWRWQDDFAERFPKVIATSHLFDWDR 148

Query: 178 DRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEILSFSGARY---RQVGPGAKKSMSLH- 233
           DRL+A       +L+L ++ R +G  LA  V E L     R    RQ  P   +  S H 
Sbjct: 149 DRLTACGGMAVTDLLLAVLARDHGAELAGAVSEELVVERIREGGERQRIPLQNRLGSSHP 208

Query: 234 -LRTIVELMENNLEETLSLDQLAAYSGRSRRQIDRLFQAQLGTSPRRYYMELRITKSRRL 292
            L   V LME N+EE L+ D++A +   SRRQ++R+F+  L   P +YY+ELR+ K+R++
Sbjct: 209 KLTQAVLLMEANIEEPLTTDEIAQHVCVSRRQLERIFKQYLNRVPSQYYLELRLNKARQM 268

Query: 293 LQYSDLSVMEVAVACGFVSVSHFSKCYAAYFGYPPSREQR 332
           L  +  S++++ ++CGF S  HFS  Y  +FG  P RE R
Sbjct: 269 LMQTSKSIIQIGLSCGFSSGPHFSSAYRNFFGATP-REDR 307