Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 335 a.a., AraC family transcriptional regulator from Pseudomonas putida KT2440

 Score =  152 bits (384), Expect = 1e-41
 Identities = 110/309 (35%), Positives = 165/309 (53%), Gaps = 12/309 (3%)

Query: 34  FILLEHFSMASFTVAMDVLVTANLL-RADSFQFTPLSLDGDRVLSDLGLELVATELSAAA 92
           F++L +F+      A++ L  ANL  R   ++   ++ D   V++  G+  V  + +   
Sbjct: 24  FLILPNFTTIGLASAVETLRMANLAARKPLYRSVLIAADDAPVVASNGMR-VLPDYNITN 82

Query: 93  LKELDLLVVCGGL---RTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGC 149
              LD L+V G     R+    P +D  L   A   + LGG+  G++ L +A +L  Y C
Sbjct: 83  APALDALLVVGANPIDRSRSNRPLID-WLRQLARQRLPLGGICTGSYLLAKAELLKGYRC 141

Query: 150 SIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYG--DGLAEG 207
           +IH E   +L    P   I+   F LDRDR + +    AM++ML LV R  G  D  A+ 
Sbjct: 142 TIHWEDLPTLQAHFPGIVISSQLFELDRDRYTCSGGVAAMDMMLQLVARDTGGQDIAAKA 201

Query: 208 VEEILS--FSGARYRQVGP--GAKKSMSLHLRTIVELMENNLEETLSLDQLAAYSGRSRR 263
            E +L     G R RQ  P      S    L  +V +ME NLEE L L++LA+ +  + R
Sbjct: 202 AELLLCDRVRGERERQRVPLRTLLGSAQPKLSQVVAIMEANLEEPLGLEELASLNDVTVR 261

Query: 264 QIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYAAYF 323
           Q++RLF   L  +P +YY+ELR++++R LL  SD+ V EVA+ACGF S +HFSK Y+ +F
Sbjct: 262 QLERLFHKYLQRTPSQYYLELRLSRARELLLRSDVQVREVALACGFSSPAHFSKSYSRFF 321

Query: 324 GYPPSREQR 332
           G  P  E+R
Sbjct: 322 GLSPLGERR 330