Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 319 a.a., HTH-type transcriptional regulator CdhR from Pseudomonas putida KT2440

 Score =  149 bits (377), Expect = 7e-41
 Identities = 103/306 (33%), Positives = 158/306 (51%), Gaps = 5/306 (1%)

Query: 32  VDFILLEHFSMASFTVAMDVLVTANLLRADSFQFTPLSLDGDRVLSDLGLELVATELSAA 91
           + F+L+  FS   F  A++ L  AN      +++  LSLDG+ VL+  G+ + A      
Sbjct: 9   IAFLLVPGFSAMGFISAVEPLRVANRFGGQLYRWQVLSLDGEAVLASNGMSINADAALGE 68

Query: 92  ALKELDLLVVCGGLRTPLKYPELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLDDYGCSI 151
                 LLVV G        P+L   L       + LGG+  GA  L  AG+L+ Y  ++
Sbjct: 69  GEPANILLVVAGFEPLANVAPKLLHALRRLNHEAVMLGGIDTGAMVLAEAGLLEGYRATL 128

Query: 152 HPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGLAEGVEEI 211
           H E   +  ER P  + T   F +DR R++ A    +++LML L+ + +G  LA  V E 
Sbjct: 129 HWEALEAFKERYPGLQATQELFEIDRSRITCAGGTASIDLMLHLIAQSHGSELAVKVSEQ 188

Query: 212 LSFSGARYRQ----VGPGAKKSMS-LHLRTIVELMENNLEETLSLDQLAAYSGRSRRQID 266
                 R RQ    +  GA+  +S   L   +  ME ++E  LS  +LAA    +RRQ++
Sbjct: 189 FVLGRIRQRQDHQRMQIGARYGISNKKLVHAIGEMEKHIEPPLSTLELAAAIKVTRRQLE 248

Query: 267 RLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYAAYFGYP 326
           RLF+  L  +P  +Y+ LR+ K+R+LL  +D+SV EV++ACGF   S+F++ Y   FG  
Sbjct: 249 RLFRMHLDATPSGFYLGLRLDKARQLLAQTDMSVTEVSLACGFELPSYFTRRYKLRFGRC 308

Query: 327 PSREQR 332
           P  E+R
Sbjct: 309 PREERR 314