Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 368 a.a., AraC-family transcriptional regulator from Pseudomonas putida KT2440

 Score =  197 bits (501), Expect = 3e-55
 Identities = 115/317 (36%), Positives = 182/317 (57%), Gaps = 9/317 (2%)

Query: 25  NAQAPYRVDFILLEHFSMASFTVAMDVLVTANLLRA-DSFQFTPLSLDGDRVLSDLGLEL 83
           N   P  + F+LL++F++ S   A++ L  AN L   + +++  L++DG +V +  GL+ 
Sbjct: 12  NRTTPQSIGFLLLDNFTLISLASAVEPLRMANQLSGRELYRWHTLTIDGGQVWASDGLQ- 70

Query: 84  VATELSAAALKELDLLVVCGGLRTPLKYP-ELDRLLNDCAAHGMALGGLWNGAWFLGRAG 142
           +  + + +    +D ++VCGG+        E    L   A     LG +  G+W L  AG
Sbjct: 71  ITPDAAISNAPPIDTVIVCGGVGIQRSVTREHVTWLQAQARQSRRLGAVCTGSWALACAG 130

Query: 143 VLDDYGCSIHPEQRASLSERSPQTRITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGD 202
           +LD + CS+H E  A++ E  P+  ++   FTLDR+R +++     +++ML L+ R +G 
Sbjct: 131 LLDGFDCSVHWECLAAMQEAFPRVNMSTRLFTLDRNRFTSSGGTAPLDMMLHLISRDHGR 190

Query: 203 GLAEGVEEILSFSGARYRQVGPGAKKSMSL-----HLRTIVELMENNLEETLSLDQLAAY 257
            L+  + E+  +   R  Q          L      L+ IV LME NLEE + LD+LA Y
Sbjct: 191 ELSAAISEMFVYERIRNEQDHQRVPLKHMLGTNQPKLQEIVALMEANLEEPIDLDELAVY 250

Query: 258 SGRSRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSK 317
              SRRQ++RLFQ  L  SP RYY++LR+ ++R+LL+ + +S++EVA  CGFVS  HFSK
Sbjct: 251 VSVSRRQLERLFQKYLHCSPSRYYLKLRLIRARQLLKQTPMSIIEVASVCGFVSTPHFSK 310

Query: 318 CYAAYFGYPPSREQRLG 334
           CY  YFG PP R++R+G
Sbjct: 311 CYREYFGIPP-RDERVG 326