Pairwise Alignments

Query, 335 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 343 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  108 bits (270), Expect = 2e-28
 Identities = 88/312 (28%), Positives = 149/312 (47%), Gaps = 12/312 (3%)

Query: 32  VDFILLEHFSMASFTVAMDVLVTA----NLLRADSFQFTPLSLDGDRVLSDLGLELVATE 87
           V F+L + F++++F   +DVL  A    +  R    +++ LS     V S  G++ V  +
Sbjct: 12  VAFLLADRFTLSAFANFVDVLRLAADEADRSRPILCEWSVLSATLANVQSSCGVK-VQPD 70

Query: 88  LSAAALKELDLLVVCGGLRTPLKY--PELDRLLNDCAAHGMALGGLWNGAWFLGRAGVLD 145
                    D +VV GGL +      PE  R L D AA G+ + GL  G + L  AG+LD
Sbjct: 71  TRLIDAGHYDYIVVVGGLISDHSALPPEALRFLKDRAAAGIPIVGLCTGVFILHEAGLLD 130

Query: 146 DYGCSIHPEQRASLSERSPQTR-ITPASFTLDRDRLSAASPNGAMELMLGLVRRLYGDGL 204
            Y C +    R    +R    + ++   F +DRDRL+ +  +GA  L   LV R  G   
Sbjct: 131 GYRCCVSWFHRQDFLDRFDTVQMVSDQIFVIDRDRLTCSGGHGAAHLAAFLVERHVGQSA 190

Query: 205 AEGVEEIL----SFSGARYRQVGPGAKKSMSLHLRTIVELMENNLEETLSLDQLAAYSGR 260
           A     I+    + SG + +     A+K+    ++  +  M+ N+E   ++ +LA   G 
Sbjct: 191 AIKSLNIMMIDSALSGEKPQPGQQSARKANDPLVKKAILRMQQNIEVPRTVLELAHDLGL 250

Query: 261 SRRQIDRLFQAQLGTSPRRYYMELRITKSRRLLQYSDLSVMEVAVACGFVSVSHFSKCYA 320
            RR ++R F   L  +P + Y+ELR+ ++  LL+ +   + ++A+A GF    H S+   
Sbjct: 251 GRRSLERRFLNDLKATPSKVYLELRLDRALSLLRTTHDPITQIALATGFCDAPHLSRTLR 310

Query: 321 AYFGYPPSREQR 332
              G+ PS  ++
Sbjct: 311 TERGFTPSEYRK 322