Pairwise Alignments

Query, 290 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

Subject, 307 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 73.6 bits (179), Expect = 5e-18
 Identities = 78/271 (28%), Positives = 120/271 (44%), Gaps = 27/271 (9%)

Query: 41  GAIDPVSFTAVRLASGALFLLLLIRLR-------SPVHTMGGSWWGGLALFLYAFLFSAA 93
           G +DP+   ++R A  +L LL  + L        SP   +     G   +F Y   F   
Sbjct: 32  GTVDPLLAASLRFALASLALLGFLGLARIPLARPSPRQLLQLGMLGFFGIFFYNLCFFYG 91

Query: 94  YLQLGAGVGALLLFGAVQITMFGFA--WYRGEHITVRMLLGMLIAFTGLLVLLL---PGV 148
              + A   +L++  A+   + G A  W   E +    + G+L+  TG  V+++   P V
Sbjct: 92  LQSINASRASLIV--ALNPAVIGLASRWLFKERLGASNVAGILLCLTGAAVVIVSRNPHV 149

Query: 149 SAPPLAS---ALLMALSGVAWGVYTLLGKGSPRPLA--DTVGNFARSLPCLVLLLPMLLL 203
                +S    LL+    V WG+Y+L  +G  + L    TV  ++  L  L+L L  L++
Sbjct: 150 LNEATSSWRGDLLIFGCVVGWGIYSLFSRGLNQSLGPLQTV-TWSILLGTLMLTLTTLIM 208

Query: 204 GA------GPHLTPLGLLYALGSGVLASGAGYAVWYGVVRQISAQQAATLQLSVPLIAAL 257
           G       G   T  GL  A   GVL S   Y  +Y  +R+I A ++       PL A +
Sbjct: 209 GRFTLEAMGRLQTAQGLSLAY-LGVLGSALAYIGYYDGIRRIGATRSGVFIALNPLTAVI 267

Query: 258 GGVALIGEPVSLRLLIACVVVLGGIALALAP 288
            G  L+ EP+SL +LI   V+L GI L   P
Sbjct: 268 CGALLLDEPLSLPMLIGGAVILLGIYLCNKP 298