Pairwise Alignments

Query, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 327 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 78.6 bits (192), Expect = 2e-19
 Identities = 75/303 (24%), Positives = 119/303 (39%), Gaps = 12/303 (3%)

Query: 14  ERQVRWAEAISDTYFPLSLEFAAGQPFDGHLQRWSTPSTPLSLSRLRSSQLGYSRSKAHI 73
           +RQ  W    +  +  L ++      FD  +  +      + +    S ++    ++  I
Sbjct: 15  DRQACWGRINTSYFGALRVQCLDTGTFDARMDAYELGPLGMFMIEAPSHRVARPDTRNEI 74

Query: 74  GQD-HEAFYLVTVPHGSEVHFEQDGHQISCSPGGFIVERGDAPYRFHYGTQNDLWVLKLP 132
             D H    L    HG   H  Q   +    PG + +     PY      ++ L  + +P
Sbjct: 75  ALDQHYKLVLQLEGHG---HISQRDREFHLHPGDWSLYDPRVPYAITNPERSRLLAITIP 131

Query: 133 ERALKANLLGHKRYTRHCFDARQGLGRIFVEQLDLCARHFDTSPPAARHLLLEQASATLL 192
            +  K   +           A QGL  +    L   A    + P A    + +     L 
Sbjct: 132 RQQFKGMKIPDLHTCEAHTPAMQGLYAVLGSFLTSLADQLPSLPNAVGRSVSDTVLGLLA 191

Query: 193 --LALQQDERVLGSEGSN-LSTLHLTRVEQYVQQNLGDPELSPQTIAGACGLSLRYLHKL 249
             LA   DE+     G++ +  +   RV+Q+V  +L DP LS   IA     S RYLH++
Sbjct: 192 STLATHSDEQF----GAHPVPGVLKARVKQFVHAHLADPALSLDLIAQQLRCSKRYLHRV 247

Query: 250 FAITPYTLNEWVRLQRLEAVHRQLRDPHCHLA-IGELAFRWGFADQAQFTRAFRQQYGCT 308
           F     TL+ ++   RLE     LR+     A + E+AF WGF   A F R F+ QYG +
Sbjct: 248 FEDEDQTLDRFIWQMRLERCSEALRNAVGRRASVSEIAFAWGFNSSAHFCRVFKAQYGVS 307

Query: 309 ASE 311
             E
Sbjct: 308 PRE 310