Pairwise Alignments

Query, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 336 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score = 60.1 bits (144), Expect = 7e-14
 Identities = 71/310 (22%), Positives = 119/310 (38%), Gaps = 15/310 (4%)

Query: 13  PERQVR-WAEAISDTYFPLSLEFAAGQPFDGHLQRWSTPSTPLSLSRLRSSQLGYSRSKA 71
           P+RQ+  W E +      +      G+PF   + R+      +  +  RS  +   RS A
Sbjct: 30  PQRQLEAWRERVGHVIDVVPSSAGIGKPFQAAIDRYEVGD--IVFTDCRSDAMLLERSLA 87

Query: 72  HIGQDHE---AFYLVTVPHGSEVHFEQDGHQISCSPGGFIVERGDAPYRFHYGTQNDLWV 128
            I  D+    AF++        V       + + +    +      P R H   +N   V
Sbjct: 88  RISTDNVRNFAFHVFAEGDVDSVTVRSSAQRDAPAAAKLVALDMGQPVRMH---RNACRV 144

Query: 129 LK--LPERALKANLLGHKRYTRHCFDARQGLGRIFVEQLDLCARHFDTSPPAARHLLLEQ 186
           L   +P   L+                   + R+ ++      R   T    A    +  
Sbjct: 145 LSFFVPGTMLQEVFPDPAAVHARTMQPDSPIARLALDHAAALGREIATLSAPAAEGAVRD 204

Query: 187 ASATLLLALQQDERVLGSEGSNLSTLHLTRVEQYVQQNLGDPELSPQTIAGACGLSLRYL 246
           A   L+ +  +  R+ G   +        +V +YVQ NL   +LSP+ +  A  L    L
Sbjct: 205 AVQLLVASFGKQARLSGGARAAARAAMFGQVRRYVQANLHRADLSPENVLAALHLPRPTL 264

Query: 247 HKLFAITPYTLNEWVRLQRLE-AVHRQLRDPHCHLAIGELAFRWGFADQAQFTRAFRQQY 305
           ++LF      L  ++R  RL  A    +R PH  L + ++A+  GF   + FTRAFR+ Y
Sbjct: 265 YRLFQHEG-GLGAYIRHLRLRHAADDLVRYPH--LMVTDVAYGVGFKSPSDFTRAFRRAY 321

Query: 306 GCTASEVRAT 315
             +  E RA+
Sbjct: 322 SMSPQEFRAS 331