Pairwise Alignments

Query, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 320 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  135 bits (339), Expect = 2e-36
 Identities = 88/316 (27%), Positives = 149/316 (47%), Gaps = 6/316 (1%)

Query: 5   LSTHGWPQPERQVRWAEAISDTYFPL---SLEFAAGQPFDGHLQRWSTPSTPLSLSRLRS 61
           LST    + +R   W + I + Y  L   +++ +    F+G +++ + PS  L +S + S
Sbjct: 5   LSTDAVSRDQRLAYWTDMICNVYVQLECDAVQQSGTGNFEGSIRQHTLPS--LDMSVVTS 62

Query: 62  SQLGYSRSKAHIGQDHEAFYLVTVPHGSEVHFEQDGHQISCSPGGFIVERGDAPYRFHYG 121
                 R+  HI    + ++LV++    +    QDG     S G F +     PY   + 
Sbjct: 63  GPQKVMRTPGHIAHSSDDYFLVSIQARGQGVVRQDGRDAVLSAGDFALYDSTRPYELLFE 122

Query: 122 TQNDLWVLKLPERALKANLLGHKRYTRHCFDARQGLGRIFVEQLDLCARHFDTSPPAARH 181
              +  VLKLP   L+  L   +  T      R+G G + +  +       DT  PA+  
Sbjct: 123 ESFEQIVLKLPGDRLRGELRDTEALTATTVSGREGAGHLLLGMIRTLREDIDTLQPASAL 182

Query: 182 LLLEQASATLLLALQQDERVLGSEGSNLSTLHLTRVEQYVQQNLGDPELSPQTIAGACGL 241
            +     + L+  LQ          SNL+  HL RV++ + + L DP LS  T+A   G+
Sbjct: 183 AVAHGVQSILVAGLQTLPAARAPALSNLTAYHLARVKRLIDEQLADPMLSVGTLAAQLGV 242

Query: 242 SLRYLHKLFAITPYTLNEWVRLQRLEAVHRQLRDPH-CHLAIGELAFRWGFADQAQFTRA 300
           S+ ++H++F   P T ++++  +RLEA  R L +P      + E+A+  GF D A F+RA
Sbjct: 243 SVSHIHRVFKSEPLTPSQYIWERRLEACSRDLLEPRLAGRPVAEIAYGRGFNDAAHFSRA 302

Query: 301 FRQQYGCTASEVRATR 316
           FR+++GC+    R  R
Sbjct: 303 FRERFGCSPRAWRQQR 318