Pairwise Alignments

Query, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 318 a.a., BenABC operon transcriptional activator from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 7e-16
 Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 24/218 (11%)

Query: 104 PGGFIVERGDAPYRFHYGTQNDLWVLKLPERALKANLLGHKRYTRHCFDARQGLGRIFVE 163
           PG  ++   D P    Y    + ++LK+P R L + +   +R+ R     R       ++
Sbjct: 99  PGELLLINPDDPVDLTYSEDCEKFILKVPTRLLDS-ICDEQRWQRPDGGVRFLRNHYRLD 157

Query: 164 QLD--------LC--ARHFDTSPPAARHLLLEQASATLLLALQQDERVLGSEGSNLSTLH 213
           +LD        +C  A   D+ P    H    Q  A+ LL L      +  E  +     
Sbjct: 158 ELDGFVNLLAMVCHEAEVSDSLPRVQGHY--SQIVASKLLTLMSTN--IRRESLSAPQAG 213

Query: 214 LTRVEQYVQQNLGDPELSPQTIAGACGLSLRYLHKLF----AITPYTLNEWVRLQRLEAV 269
           L R+  Y+++NL   ELS + +A    +SLR L+ LF     ITP     +VR ++LE V
Sbjct: 214 LERILDYIERNL-KLELSAEVLAEQACMSLRSLYALFDQHLGITP---KHYVRQRKLERV 269

Query: 270 HRQLRDPHCHL-AIGELAFRWGFADQAQFTRAFRQQYG 306
           H  L DP C + ++ ELA  +GF    +F+  +RQQ+G
Sbjct: 270 HACLSDPTCGVRSVTELALDYGFLHLGRFSEIYRQQFG 307