Pairwise Alignments

Query, 318 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 347 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score = 66.2 bits (160), Expect = 1e-15
 Identities = 63/265 (23%), Positives = 114/265 (43%), Gaps = 14/265 (5%)

Query: 54  LSLSRLRSSQLGYSRSKAHIGQDHEAFYLVTVPHGSEVHFEQDGHQISCSPGGFIVERGD 113
           ++L R +SS   + RS+  + +D    +L+   + S     + G   +  PG   +    
Sbjct: 62  VALGRTQSSAQDFDRSRNKLARDGMDGFLLQF-YASGKSMSRRGTGETAGPGDLYIIDMA 120

Query: 114 APYRFHYGTQNDLWVLKLPERALKANLLGHKRYTRHCFDARQGLGRIFVEQLDLCARHFD 173
            P      T +D   L +P R L+  L+G   +      A   L  +  E +    RHFD
Sbjct: 121 QPLATAT-TDHDHLSLVVPRRLLEGRLIGSGNHHERVLPAGLPLVSLLRETMTSIYRHFD 179

Query: 174 T----SPPAARHLLLEQASATLLLALQQDERVLGSEGSNLSTLHLTRVEQYVQQNLGDPE 229
                   A    LLE A+A +   +++D          +       + +Y+  +L DP 
Sbjct: 180 VMNANDGAATVSPLLELATAAINNHVREDN------AQGVQRALRASIRRYIDNHLLDPA 233

Query: 230 LSPQTIAGACGLSLRYLHKLFAITPYTLNEWVRLQRLEAVHRQLRDPHC-HLAIGELAFR 288
           LS + + G  G+S R +++LF       +  +  +RLE     LR P   H+ I ++A  
Sbjct: 234 LSVEKVMGEFGVSRRTVYRLFEPLG-GFSACITHRRLERAMDFLRAPQSSHMTIADVAAA 292

Query: 289 WGFADQAQFTRAFRQQYGCTASEVR 313
           +GF +   F+R F++ +G +  ++R
Sbjct: 293 YGFTNPENFSRVFKKTFGLSPRQIR 317