Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 391 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  390 bits (1001), Expect = e-113
 Identities = 200/389 (51%), Positives = 254/389 (65%), Gaps = 12/389 (3%)

Query: 135 RIGEDVSEKLDYTPGVFTVEHHVRGKWACRQCETLIQAPVPAQVIDKGVPTAGLLAHVMV 194
           R+GEDVSE+LD  P  F V  H+ GKWACR C+ L+Q P   Q+ID G+P AGL+AH MV
Sbjct: 3   RVGEDVSERLDVIPAEFFVHRHIYGKWACRCCQCLVQEPAAPQIIDGGMPAAGLVAHTMV 62

Query: 195 AKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAVLNQGVIHADE 254
           + F DHLP YR E I  R+G+   RSTLA W G+ G  L PL DA +  VL+  V+HADE
Sbjct: 63  SHFVDHLPYYRLESINARSGVHTPRSTLASWSGRGGAALVPLYDAHKRFVLSAAVLHADE 122

Query: 255 TPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYDFSPSRAGEHARNFLG---------D 305
           TPV ML PG  KT RAYVW Y+   F A+  V+YDF   R  ++   FLG          
Sbjct: 123 TPVAMLDPGAGKTKRAYVWTYARGAFDAVPGVIYDFCAGRGAQYPVAFLGPEDDRRSDPG 182

Query: 306 WNGKLVCDDFAGYKAGF--EQGITEIGCMAHARRKFFD-LHVANKSQLAEQALHSISGLY 362
           W G LV D++A Y      + G    GC+AHARRK+ + L  A KS +A++AL  I+ +Y
Sbjct: 183 WRGTLVRDEYAAYDKVMVAQPGRIPAGCLAHARRKYDELLRDAGKSAVADEALRRIAQIY 242

Query: 363 EVERQARDMSDEDRWRIRQEMAVPILKTLHDWMLAQRDLVPNGSATAKALDYSLKRWVAL 422
            +ER+   ++ ++R   RQ  A P+ + LH W+  +R  VP+GSATAKAL+YSL  W AL
Sbjct: 243 RLERELAALTSQERLTRRQRDAKPLWEDLHSWLRLERGRVPDGSATAKALNYSLNAWSAL 302

Query: 423 TRYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGHDPY 482
           T+ L DG V +DNN  EN IRPWA GR  WLFAGS  +G+RAA +MSL++SA++ GHDP+
Sbjct: 303 TQNLLDGDVNVDNNHCENLIRPWAQGRRAWLFAGSELAGQRAAVVMSLVRSAKLQGHDPW 362

Query: 483 AYLKDVLTRLPTQRASEIGQLLPHQWVPA 511
           AYLKDVLTRLPT   S I +LLPH W PA
Sbjct: 363 AYLKDVLTRLPTHLNSRIDELLPHNWRPA 391