Pairwise Alignments

Query, 511 a.a., transposase from Pseudomonas putida KT2440

Subject, 510 a.a., Mobile element protein from Variovorax sp. SCN45

 Score =  644 bits (1661), Expect = 0.0
 Identities = 311/511 (60%), Positives = 388/511 (75%), Gaps = 16/511 (3%)

Query: 6   NLDQMTPEQLRALAAQALQLQSQVEAMSKKIQNDEILIEQFKFEIALLKRHKFAKRSEQI 65
           +LD ++ EQLR L A+ +           ++++   L+E+   E ALLKR KFA +SE+ 
Sbjct: 7   SLDSLSAEQLRELTARLMV----------QVRHQSALLEKLTHENALLKRMKFAAQSERF 56

Query: 66  SPAQGSLLDDLLDTDLEAIEAELKQLLPASSQAEP-RQSPKRAPLPPQFPRTVIRHEPEN 124
           +P Q SLL+D ++ DL A+ +E+  L    + A P ++  KR PLP   PR  +RHEP +
Sbjct: 57  NPEQKSLLEDEIEADLAAVASEIDALTQTQAPATPDKKQAKRLPLPAHLPRREVRHEPAS 116

Query: 125 TQCACGCQLQRIGEDVSEKLDYTPGVFTVEHHVRGKWACRQCETLIQAPVPAQVIDKGVP 184
           T CACGCQ++R+GEDV+EKLDY PGVF+VE H+RGKWAC +CE++ QAPV A VIDKG+P
Sbjct: 117 TTCACGCQMKRVGEDVAEKLDYMPGVFSVERHIRGKWACARCESITQAPVEAHVIDKGIP 176

Query: 185 TAGLLAHVMVAKFADHLPLYRQEKIFGRAGLAIARSTLAQWVGQTGVRLQPLVDALREAV 244
           T GLLA V+V K+ADHLPLYRQE IFGRAGLAI RSTLAQWVG  GVRLQPLVDAL+  +
Sbjct: 177 TTGLLAQVLVGKYADHLPLYRQEAIFGRAGLAIPRSTLAQWVGTCGVRLQPLVDALKTEI 236

Query: 245 LNQGVIHADETPVQMLAPGEKKTHRAYVWAYSTTPFSALNAVVYDFSPSRAGEHARNFLG 304
           L   V+HADETPV ML PG+ KTHRAY+WAY+   F ++ AVVYDF  SR+GEHAR+FLG
Sbjct: 237 LGHRVLHADETPVAMLKPGDGKTHRAYLWAYAPGAFESIKAVVYDFCESRSGEHARHFLG 296

Query: 305 D-----WNGKLVCDDFAGYKAGFEQGITEIGCMAHARRKFFDLHVANKSQLAEQALHSIS 359
                 W G L CDDF+GYKA    G+TE+GC+AHARRKFFDLH AN+SQ+AE AL   +
Sbjct: 297 HGTDKAWKGSLTCDDFSGYKALIASGVTEVGCLAHARRKFFDLHAANQSQIAEFALQQFA 356

Query: 360 GLYEVERQARDMSDEDRWRIRQEMAVPILKTLHDWMLAQRDLVPNGSATAKALDYSLKRW 419
            +YE+ER+ +++  E R  +RQ+   PIL  LH+WM  QR  VP+GSATAKALDYSL+RW
Sbjct: 357 RVYEIEREVKELGSEQRQAVRQQQTRPILDALHEWMTLQRRQVPDGSATAKALDYSLRRW 416

Query: 420 VALTRYLDDGAVPIDNNQVENQIRPWALGRSNWLFAGSLRSGKRAAAIMSLIQSARMNGH 479
            ALTR+ DDG +P+DNN +ENQIRP A+GR+NWLFAGSLR+G+RAAA+MSLIQSARMN H
Sbjct: 417 DALTRFADDGQLPVDNNWIENQIRPIAIGRNNWLFAGSLRAGQRAAAVMSLIQSARMNEH 476

Query: 480 DPYAYLKDVLTRLPTQRASEIGQLLPHQWVP 510
           DPYAYLKDVLTRLPT +AS I +LLPH+W P
Sbjct: 477 DPYAYLKDVLTRLPTHKASRIDELLPHRWQP 507