Pairwise Alignments

Query, 111 a.a., transposase from Pseudomonas putida KT2440

Subject, 116 a.a., IS66 family insertion sequence element accessory protein TnpB from Escherichia coli ECRC100

 Score = 46.6 bits (109), Expect = 1e-10
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 7   IWLATEPMDMRAGTETALARVIAVFGAAKPHCAYLFA--NRRANRMKVLVHDGVGVWLAA 64
           IWL     DMR        +V  V     P   +LF    RR + +K+L  D  G+ L  
Sbjct: 10  IWLVAGVTDMRKSFNGLGEQVQHVLDE-NPFSGHLFIFRGRRGDTIKILWADADGLCLFT 68

Query: 65  RRLNQGKFHWPGIRHGCEVELDSEQLQALVLGLPWQR 101
           +RL +G+F WP +R G +V +   QL  L+  L W++
Sbjct: 69  KRLEEGQFIWPAVRDG-KVSITRSQLAMLLDKLDWRQ 104