Pairwise Alignments

Query, 392 a.a., transposase from Pseudomonas putida KT2440

Subject, 342 a.a., IS110 family transposase from Magnetospirillum magneticum AMB-1

 Score =  186 bits (471), Expect = 1e-51
 Identities = 117/340 (34%), Positives = 176/340 (51%), Gaps = 16/340 (4%)

Query: 45  TTICVDLAKQVFQLAGEDATGRVIYEDRIKSRQAFHDFLLRLPTTVAVLMECGPGAQAWA 104
           +TI  DLAK+VFQ+ G D  G V    +++  +    F    P  V   ME    A  WA
Sbjct: 5   STIGFDLAKRVFQVHGVDGDGAVTIRRQLRRSEVVTFFAKLSPCVVG--MEACASAHYWA 62

Query: 105 RLLQAKGNPVRILPAQRVAEH-RSGAKNDRNDCYAILRAGRDTSIASIPIKSTTALAIQA 163
           R L   G+ VR++P  RV  + + G KND  D  AI  A     +  +P+KS  A A+  
Sbjct: 63  RTLAKLGHEVRLIPPSRVKPYVKRGRKNDAADAAAIAEAVTRPHMEFVPVKSEEAQAVLM 122

Query: 164 LHRIRRGNIKRHTALGNQIRGLLLEHGVSMPQGDAAINKHVPRALEDASLPLPDLLRELL 223
           LHR RR  + + T LGN +R    E+G+  P+G   + + V  AL+     LP   RE +
Sbjct: 123 LHRTRRLLVTQRTMLGNALRSHFAEYGIIEPEGQGGLARLVVCALDAPDAALPQAAREAM 182

Query: 224 DELLMDWLSLGERITALSRRLEATAQEDKVAQRLITIRGVGPIIATAIVAKQTDPSRFAS 283
             L      +  +I AL   +    + D  +QR+ +I G+GP+IA+AIVA   DP RF +
Sbjct: 183 AMLAAHVREIDSKIDALDHEILRWHRNDADSQRVASIPGIGPLIASAIVAAMGDPKRFKT 242

Query: 284 GRMYSAFFGIVPDQHSSGNKIRLGKMSKRGDGYIRSLMIQGAHSVLSQLRPDSDQPDDRR 343
           GR ++A+ G+VP Q+S+G K  LG ++K GD Y+RSL++ GA   L + R +        
Sbjct: 243 GRDFAAWLGLVPSQNSTGGKTVLGPITKAGDRYLRSLLVVGATGTLWRRRKEQG------ 296

Query: 344 LLRWLSRL-----GRKEAAIRLANRNLRIIWALLQSDQVY 378
              WL+ +       ++ ++ LAN+  R  WA+L    +Y
Sbjct: 297 --TWLAGMMARGKTARQISVALANKMARTAWAILAKGGLY 334