Pairwise Alignments

Query, 392 a.a., transposase from Pseudomonas putida KT2440

Subject, 339 a.a., IS110-like element ISEch3 family transposase from Dickeya dadantii 3937

 Score =  171 bits (434), Expect = 2e-47
 Identities = 116/335 (34%), Positives = 169/335 (50%), Gaps = 4/335 (1%)

Query: 45  TTICVDLAKQVFQLAGEDATGRVIYEDRIKSRQAFHDFLLRLPTTVAVLMECGPGAQAWA 104
           +T+ +DLAK VFQL G D +G+ +   R+ +R AF  FL +LP  + + ME    A  +A
Sbjct: 4   STLGIDLAKNVFQLHGVDNSGKTVLRKRL-TRNAFLPFLAQLPPCL-IGMEACASAHHFA 61

Query: 105 RLLQAKGNPVRILPAQRVAEHRSGAKNDRNDCYAILRAGRDTSIASIPIKSTTALAIQAL 164
           R L   G+ VR++P   V  +    K D  D  AI  A    ++  + +KS T  AI AL
Sbjct: 62  RRLMQYGHQVRLMPPSYVKPYVKRDKTDARDAEAICEAVARPNMRFVAVKSETQQAILAL 121

Query: 165 HRIRRGNIKRHTALGNQIRGLLLEHGVSMPQGDAAINKHVPRALEDASLPLPDLLRELLD 224
           H  R   I+   A  N +R +L E GV M  G +A+ K +P  LED    L  L R    
Sbjct: 122 HTERDLLIRERVASTNSLRAMLAEFGVVMETGLSALYKTLPVILEDGENALTALTRRSAA 181

Query: 225 ELLMDWLSLGERITALSRRLEATAQEDKVAQRLITIRGVGPIIATAIVAKQTDPSRFASG 284
             L     L  +I  + R L A     +  +RL  + GVG + AT +VA   D S+F S 
Sbjct: 182 RQLTHLRELEHQIAEVERELSAWFHSQEACRRLEKVPGVGMLTATYMVAAVGDGSQFTSS 241

Query: 285 RMYSAFFGIVPDQHSSGNKIRLGKMSKRGDGYIRSLMIQGAHSVLSQLRPDSDQPDDRRL 344
           + ++A+ G+ P +HSSG K  LG +SKRGD Y R L+I GA ++ + +    D+      
Sbjct: 242 KQFAAWVGLTPKEHSSGGKQWLGPISKRGDRYFRYLLIHGARALAAVIERHRDK--QTWF 299

Query: 345 LRWLSRLGRKEAAIRLANRNLRIIWALLQSDQVYQ 379
              L R     A +  A R  RI+W++L+    Y+
Sbjct: 300 YSLLKRKPFNVAVVAQAGRTARILWSMLRGGSEYR 334