Pairwise Alignments

Query, 392 a.a., transposase from Pseudomonas putida KT2440

Subject, 334 a.a., IS110-like element ISEch4 family transposase from Dickeya dadantii 3937

 Score =  145 bits (367), Expect = 1e-39
 Identities = 109/331 (32%), Positives = 159/331 (48%), Gaps = 14/331 (4%)

Query: 45  TTICVDLAKQVFQLAGEDATGRVIYEDRIKSRQAFHDFLLRLPTTVAVLMECGPGAQAWA 104
           T I +DL K  F +  +D  G  +   +    Q      L   T   V+ME   GA   A
Sbjct: 5   TLIGIDLGKHSFHVHAQDKNGNALLRKKFSRNQL--TAFLSTCTASTVVMESCAGAHFMA 62

Query: 105 RLLQAKGNPVRILPAQRVAEHRSGAKNDRNDCYAILRAGRDTSIASIPIKSTTALAIQAL 164
           R +   G+ V+++  Q V       KND  D  AI  A    S+  +  ++    A+ A 
Sbjct: 63  RHISQFGHQVKLISPQFVRPFVKSNKNDFIDAEAICEAASRPSMRFVTPRTEDQQAMSAF 122

Query: 165 HRIRRGNIKRHTALGNQIRGLLLEHGVSMPQGDAAINKHVPRALEDASLPLPDLLRELLD 224
           HR+R   ++      NQ+   LLE G+SMP+G A I + +   LE+  LP    L  LL 
Sbjct: 123 HRVRDTLVRERVKTTNQMHAFLLEFGISMPRGIAIIRR-LAVVLEEHELP--PYLARLLM 179

Query: 225 ELLMDWLSLGERITALSRRLEATAQEDKVAQRLITIRGVGPIIATAIVAKQTDPSRFASG 284
            L   +  L E+I  L + L+     D  AQRL+TI GVG I A+ +  K  D   +AS 
Sbjct: 180 RLHQHYACLTEQIKELEQELKIHIAGDDTAQRLLTIPGVGLITASLLATKLGDGKSYASS 239

Query: 285 RMYSAFFGIVPDQHSSGNKIRLGKMSKRGDGYIRSLMIQGAHSVLSQLRPDSDQPDDRRL 344
           R ++A  G+VP Q+S+G K  L  +SKRGD  +R L++Q A + + +L     + +  RL
Sbjct: 240 RDFAASTGLVPRQYSTGGKSTLMGISKRGDKNLRRLLVQCARAFMQRL-----EHNQGRL 294

Query: 345 LRW----LSRLGRKEAAIRLANRNLRIIWAL 371
             W    LSR      A  LAN+  RI W++
Sbjct: 295 ADWVKTQLSRHHSNVVACGLANKLARIAWSV 325