Pairwise Alignments

Query, 598 a.a., putative Type II secretion system protein from Pseudomonas putida KT2440

Subject, 472 a.a., general secretion pathway protein GspE from Pseudomonas simiae WCS417

 Score =  305 bits (781), Expect = 3e-87
 Identities = 170/393 (43%), Positives = 237/393 (60%), Gaps = 22/393 (5%)

Query: 204 SEDQSRVVKLVNSTLYDALKLHASDIHLGMTGQGLTIKYRIDGVLNGAGKASGSAFADQV 263
           ++D + V++++N+ L  A +  ASDIH+        ++YR+DG L     +   A    +
Sbjct: 99  TQDGAPVIRMINALLTQAARDEASDIHIEPYETHSVVRYRVDGTLRDV-VSPRKALHGAL 157

Query: 264 ISRIKVMAELDIGEKRVPQDGRFKVAVGDRQIDFRVSIMPSIFGEDAVLRVLDKQDLSDR 323
           +SRIK+MA+LDI EKR+PQDGR  + V  R ID RVS +P+  GE  V+R+LDKQ     
Sbjct: 158 VSRIKIMAQLDIAEKRLPQDGRIALRVAGRPIDIRVSTVPTGHGERVVMRLLDKQ----- 212

Query: 324 VSGVQLQALGFADETLRALRRLAAEPYGMILVTGPTGSGKTTTLYAMISEINHGVDKIIT 383
              +QL+ LG A + L  L  L  +P+G++LVTGPTGSGKTT+LYA ++ ++     I+T
Sbjct: 213 AGRLQLETLGMAPQLLARLDTLIRQPHGIVLVTGPTGSGKTTSLYAALARLDASTSNILT 272

Query: 384 IEDPVEYQLPGVLQIPVNEKKGLTFARGLRSILRHDPDKILVGEIRDPDTAQIAVQSALT 443
           +EDPVEY LPG+ QI VN K  +TF   LR+ILR DPD I++GEIRD +TAQIAVQ++LT
Sbjct: 273 VEDPVEYDLPGISQIQVNAKIDMTFGLALRAILRQDPDIIMIGEIRDLETAQIAVQASLT 332

Query: 444 GHLVFTTIHANNVFDVIGRFSQMQVDPYSFVSALNAVLAQRLIRLACPHCATPCEHDDDT 503
           GHLV  T+H N+    + R   M V+P+   S+L  VLAQRL+R  CPH    C+ +D +
Sbjct: 333 GHLVLATLHTNDAVSAVNRLIDMGVEPFLLASSLLGVLAQRLVRRLCPH----CKQEDPS 388

Query: 504 LYGSGLTREGVAGWTFVRVKGCGHCRGSGYRGRSAIAELLHLDDDLRQMIVERRPLAQIK 563
             G+         W   R  GC  C   GY GR+ I EL  +DDD+R +I +      ++
Sbjct: 389 APGT---------W---RPVGCAQCNQIGYSGRTGIHELFCVDDDVRSLIHQGANEQDLR 436

Query: 564 TLACQRGLRLLRASALDLVRDGRTTLEEINRVT 596
             A + G+  +R      V  G T  EEI RVT
Sbjct: 437 LAARRAGMFSMREDGERWVHSGATAPEEILRVT 469