Pairwise Alignments

Query, 598 a.a., putative Type II secretion system protein from Pseudomonas putida KT2440

Subject, 493 a.a., type II secretion system ATPase GspE from Erwinia tracheiphila SCR3

 Score =  305 bits (780), Expect = 4e-87
 Identities = 181/441 (41%), Positives = 257/441 (58%), Gaps = 28/441 (6%)

Query: 173 EESFHA--VDALDHDAEASSE-----GDPLQRLSLAS--------ISEDQSR-VVKLVNS 216
           +ESF +  +    H +  +SE     G  L    LA         ++ED    +V+L+N+
Sbjct: 56  DESFSSRLISRFQHSSSGASEVMAELGSELDMYQLADALPNHEELMNEDSDAPIVRLINA 115

Query: 217 TLYDALKLHASDIHLGMTGQGLTIKYRIDGVLNGAGKASGSAFADQVISRIKVMAELDIG 276
            L  A+K  ASD+H+   G  + +++RIDGVL+   +      A  ++SRIKVM++LDI 
Sbjct: 116 ILSQAIKERASDVHIEPFGLLIAVRFRIDGVLHKMLEPE-RRLASMLVSRIKVMSKLDIA 174

Query: 277 EKRVPQDGRFKVAVGDRQIDFRVSIMPSIFGEDAVLRVLDKQDLSDRVSGVQLQALGFAD 336
           EKR+PQDGR  + +G + ID RVS++P   GE  V+R+LDK      V  + L  LG ++
Sbjct: 175 EKRMPQDGRISLRLGHQAIDVRVSVIPCSHGERVVMRLLDKN-----VVPLSLSHLGMSE 229

Query: 337 ETLRALRRLAAEPYGMILVTGPTGSGKTTTLYAMISEINHGVDKIITIEDPVEYQLPGVL 396
              + +  LA  P G+ LVTGPTGSGK+TTLYA+IS +N     I+TIEDPVEY + G+ 
Sbjct: 230 ALCKRVMMLANRPNGIFLVTGPTGSGKSTTLYAVISALNRAERNIMTIEDPVEYDIAGIS 289

Query: 397 QIPVNEKKGLTFARGLRSILRHDPDKILVGEIRDPDTAQIAVQSALTGHLVFTTIHANNV 456
           Q  VN K  +TFA GLR+ILR DPD IL+GEIRD +TAQIAVQ++LTGH+V  T+H N  
Sbjct: 290 QTQVNPKVEMTFAHGLRAILRQDPDVILIGEIRDRETAQIAVQASLTGHMVLATLHTNTS 349

Query: 457 FDVIGRFSQMQVDPYSFVSALNAVLAQRLIRLACPHCATPCEHDDDTLYGSGLT-REGVA 515
              I R   M V+P+    +L+ VLAQRL+R  C HC  P     +     G+  R+G+A
Sbjct: 350 VGAITRLQDMGVEPFLLSGSLSGVLAQRLVRRLCKHCRRPVTLIKEECQSLGVPWRDGLA 409

Query: 516 GWTFVRVKGCGHCRGSGYRGRSAIAELLHLDDDLRQMIVERRPLAQIKTLACQRGLRLLR 575
            W      GC HC  SGYRGR+++ E+L L+  +R  I   + + + + +A       LR
Sbjct: 410 AWV---PGGCEHCHHSGYRGRTSLHEILVLNGTMRSRI--HQNVNEAELVALSDNFMSLR 464

Query: 576 ASALDLVRDGRTTLEEINRVT 596
                 +  G T++EE+ R T
Sbjct: 465 LDGFAKILVGVTSVEEVLRAT 485