Pairwise Alignments

Query, 598 a.a., putative Type II secretion system protein from Pseudomonas putida KT2440

Subject, 492 a.a., type II secretion system protein E from Enterobacter asburiae PDN3

 Score =  313 bits (801), Expect = 1e-89
 Identities = 180/418 (43%), Positives = 260/418 (62%), Gaps = 9/418 (2%)

Query: 179 VDALDHDAEASSEGDPLQRLSLASISEDQSRVVKLVNSTLYDALKLHASDIHLGMTGQGL 238
           VD +D D +  +  + +        +++ S V++L+N+ + +A+K  ASDIH+    + L
Sbjct: 77  VDDMDADIDLMALTEEIPDNEDLLDNDENSPVIRLINAIMGEAVKEGASDIHIETFERTL 136

Query: 239 TIKYRIDGVLNGAGKASGSAFADQVISRIKVMAELDIGEKRVPQDGRFKVAVGDRQIDFR 298
           +I++R+DGVL    + +    A  ++SRIKVM++LDI EKR+PQDGR  + +G + ID R
Sbjct: 137 SIRFRVDGVLRPVLQPARK-LAPLLVSRIKVMSKLDIAEKRLPQDGRISLRIGRKAIDVR 195

Query: 299 VSIMPSIFGEDAVLRVLDKQDLSDRVSGVQLQALGFADETLRALRRLAAEPYGMILVTGP 358
           VS +PS +GE  V+R+LDK +L   ++      LG  DE L  L+ L   P+G+ILVTGP
Sbjct: 196 VSTIPSQYGERVVMRLLDKSNLKPDIN-----KLGLIDEELVKLKGLIERPHGIILVTGP 250

Query: 359 TGSGKTTTLYAMISEINHGVDKIITIEDPVEYQLPGVLQIPVNEKKGLTFARGLRSILRH 418
           TGSGK+TTLYA++S +N     I+T+EDP+EY+L GV Q  VN +  +TFARGLR+ILR 
Sbjct: 251 TGSGKSTTLYALLSALNGHERNILTVEDPIEYELEGVGQTQVNPRVDMTFARGLRAILRQ 310

Query: 419 DPDKILVGEIRDPDTAQIAVQSALTGHLVFTTIHANNVFDVIGRFSQMQVDPYSFVSALN 478
           DPD +++GEIRD +TAQIAVQ++LTGHLV +T+H N+    I R   M ++ +   S+L 
Sbjct: 311 DPDVVMIGEIRDGETAQIAVQASLTGHLVMSTLHTNSAAGAITRLRDMGLESFLIGSSLL 370

Query: 479 AVLAQRLIRLACPHCATPCEHDDDTLYGSGLTREGVAGWTFVRVKGCGHCRGSGYRGRSA 538
            V+AQRL+R  CPHC T    DD+    +  T          R  GC  CR SGY+GR+ 
Sbjct: 371 GVIAQRLVRRLCPHCRTTSPLDDNE--KALFTFMETPPKAIYRAVGCEQCRQSGYQGRAG 428

Query: 539 IAELLHLDDDLRQMIVERRPLAQIKTLACQRGLRLLRASALDLVRDGRTTLEEINRVT 596
           I E L +D  +R+ I E +    I+T   +     LR + L  V  G T+LEE+ RVT
Sbjct: 429 IHEFLVVDSAMRRAIHEDKDEMSIETQLFKEAYS-LRENGLLKVISGVTSLEEVMRVT 485