Pairwise Alignments

Query, 621 a.a., putative Secretion protein from Pseudomonas putida KT2440

Subject, 463 a.a., Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly from Variovorax sp. SCN45

 Score = 88.2 bits (217), Expect = 7e-22
 Identities = 54/159 (33%), Positives = 84/159 (52%), Gaps = 8/159 (5%)

Query: 404 LASPVIRVSNREQARIHIGQRVPIISATSVPSTQGPVITESVTYLDVGLKLEVQPTVHLN 463
           LA P +   + + A    G  +PI      P  QG + T S+ Y   G+ L + PTV  N
Sbjct: 270 LAEPTLVALSGQSASFLAGGELPI------PVPQG-LGTISIEYKPFGIGLTLTPTVLSN 322

Query: 464 NEVAIKVALEVSNATPLEA-TRQGTIPVQVDTRNAQTSLRLHDGETQVLAGLVRNDHNAS 522
             + +KVA E S+     A T  G +   + TR A T++ L DGE+ ++ GLV     ++
Sbjct: 323 ERIVLKVAPEASDLDYTNAITLNGVVVPAITTRRADTTVELGDGESFIIGGLVSRTTTSN 382

Query: 523 GNKIPGLGDIPGLGRLFGSNKDDMSKSELVLAITPRIVR 561
            +K+P LGD+P +G  F  N   M++ ELV+ +TP +V+
Sbjct: 383 ASKVPMLGDLPIIGTFFSKNNYQMNEKELVILVTPHLVK 421