Pairwise Alignments

Query, 621 a.a., putative Secretion protein from Pseudomonas putida KT2440

Subject, 734 a.a., General secretion pathway protein D from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  102 bits (254), Expect = 6e-26
 Identities = 88/360 (24%), Positives = 156/360 (43%), Gaps = 45/360 (12%)

Query: 303 DERLNTLTMRDTSDAVRMAEKLLQSQDQSNPEVVLEVEVMEVATSRILDLGLQWPNTFGV 362
           D   N+L +       R    ++   D    +V +E  + EV   +  + G+QW    G 
Sbjct: 372 DPATNSLIITAPEPQYRQLRAVIDQLDSRRAQVYVESLIAEVNAEKAAEFGIQWQGALGS 431

Query: 363 LSD------------DGNPVSVLDQLKGINSSRISIAPAPQ----------AKINAQDKD 400
             D             G  +  L Q     S  +++  A +          A+   ++ +
Sbjct: 432 SGDRVIGLLGTNFGTGGRNILELAQGNATPSPGMNLGLARRTNGVYVLGFLARFLQENGE 491

Query: 401 INTLASPVIRVSNREQARIHIGQRVPIISA----TSVPSTQGPVIT-ESVTYLDVGLKLE 455
            N L++P +   + E+A+I IGQ VP ++     T      G V   +++   DVGL L 
Sbjct: 492 GNVLSTPNLLTLDNEEAKIVIGQNVPFVTGQFTNTGSGGNNGSVNPFQTIERKDVGLTLR 551

Query: 456 VQPTVHLNNEVAIKVALEVSNATPLEATRQGTIPVQVDTRNAQTSLRLHDGETQVLAGLV 515
           V+P +  N  + + +  EVSN  P  ++   T  +  + R  ++++ + DG   VL GL+
Sbjct: 552 VKPQISENGTIKMTIYQEVSNVVP--SSVNSTTGLITNKRTIESTVLVEDGAVVVLGGLL 609

Query: 516 RNDHNASGNKIPGLGDIPGLGRLFGSNKDDMSKSELVLAITPRIVRNLPYQSPSDM---E 572
           ++++  +  K+PGLGD+P  G LF S      K+ L++ + P ++R+    S   +   E
Sbjct: 610 QDEYAGNQEKVPGLGDVPIFGNLFRSETRSRKKTNLMVFLRPVVMRDGRETSSLALDRYE 669

Query: 573 FSTGTESAMQVRQM-------APLPPMDVPGNAPTTE-----EPVVDSQMAVAPVNGSPR 620
                +   Q RQ        AP+ P  +P  AP+ +       + D Q A  PVN +P+
Sbjct: 670 LMRSVQKDAQPRQSSVLGVNEAPVMPPQLPPRAPSPDGTAPVRSLADPQTA-PPVNPAPQ 728