Pairwise Alignments

Query, 621 a.a., putative Secretion protein from Pseudomonas putida KT2440

Subject, 726 a.a., Type 3 secretion system secretin from Acinetobacter radioresistens SK82

 Score =  101 bits (252), Expect = 1e-25
 Identities = 106/495 (21%), Positives = 220/495 (44%), Gaps = 101/495 (20%)

Query: 148 EVLRLDPQNQKGMTLRSDIEN--VQARTAQPYPQLRSKLERPVTLEFRDANLKTIFEVLS 205
           E +    +N+  ++L+   E   V+ R+A  Y        + V+L+F+D  ++ + ++L+
Sbjct: 247 EYMAYQTENRLTVSLKRPEEKSTVKTRSAPNYSG------KKVSLDFQDIEVRRVLQLLA 300

Query: 206 QVAGINFIFDKDLRPDMKATIFVREVRIEDAIALLLEQNQLRQKIVNDNTVMVYPDSP-- 263
              GIN +    ++ ++  T+ +++V  + A+ ++L+   L  K  N + + + P +   
Sbjct: 301 DFTGINLVAADSVQGNI--TLRLKDVPWDQALDIILKTKNL-DKRRNGDVIWIAPVAELI 357

Query: 264 ----------------------------QKTKDYQELVMRTFYLTSIDANTALN------ 289
                                        K  D ++L+ +     +  AN A N      
Sbjct: 358 KAEEEEAKAIAQSTRLMPLQTEYIQLNYAKAVDIEKLITQGRNSGNGSANGASNNTEALG 417

Query: 290 -MVKTMLKTRD-VFVDERLNTLTMRDTSDAVRMAEKLLQSQDQSNPEVVLEVEVMEVATS 347
             V ++L  R  + +D R NTL + DT+  +    +++   D +  +V++E  ++  +T 
Sbjct: 418 DSVGSLLSPRGTISIDPRTNTLIINDTAQKLDQIRRMIDLLDVAVKQVMVEARIVRASTD 477

Query: 348 RILDLGLQWPNTFGVLS-------------------------DDGNPVSVLDQLKGIN-- 380
              ++G++W    G+LS                         DDG       Q   ++  
Sbjct: 478 FTKEMGVKW----GILSQGITRNNSLLVGGSETTLWNLRDPDDDGKYTIERPQNLNVDLG 533

Query: 381 -----SSRISIAPAPQA------KINAQDKDI--NTLASPVIRVSNREQARIHIGQRVPI 427
                +SRI+      +      +++A   D     +++P +  ++++QAR+  G ++P 
Sbjct: 534 VTASGASRIAFGLISLSDFMLDLELSALQADGYGEVISTPKVLTADKQQARVASGTQIPY 593

Query: 428 ISATSVPSTQGPVITESVTYLDVGLKLEVQPTVHLNNEVAIKVALEVSNATPLEATRQGT 487
            S+       G     +  ++D  L L V P++  + +  I++ L +++ TP   T  G 
Sbjct: 594 QSSEG----GGANAVSTTEFVDATLSLNVTPSITPDGK--IQMLLNITSDTPGNPTPTGQ 647

Query: 488 IPVQVDTRNAQTSLRLHDGETQVLAGLVRNDHNASGNKIPGLGDIPGLGRLFGSNKDDMS 547
           I +  +  N  T++ +++GET VL G+   +   +  K+P LGD+PG+GRLF  +    +
Sbjct: 648 IAINKNEIN--TNVLVNNGETVVLGGIFEQETRNTQTKVPVLGDLPGVGRLFRRDAKSNN 705

Query: 548 KSELVLAITPRIVRN 562
           K EL++ +TPRIV +
Sbjct: 706 KRELLIFVTPRIVND 720