Pairwise Alignments

Query, 636 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 636 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

 Score = 1250 bits (3234), Expect = 0.0
 Identities = 636/636 (100%), Positives = 636/636 (100%)

Query: 1   MARQLITNAHDPLHESREARLKLASEGELPLGMLRDEIDASWRRSLGHGLDCLQGEQVGL 60
           MARQLITNAHDPLHESREARLKLASEGELPLGMLRDEIDASWRRSLGHGLDCLQGEQVGL
Sbjct: 1   MARQLITNAHDPLHESREARLKLASEGELPLGMLRDEIDASWRRSLGHGLDCLQGEQVGL 60

Query: 61  GLEQGHDLRLLLERNRLLIDAVTPELDYLVARQGKAGIVILGDAQANVLAIEGQKHVLQR 120
           GLEQGHDLRLLLERNRLLIDAVTPELDYLVARQGKAGIVILGDAQANVLAIEGQKHVLQR
Sbjct: 61  GLEQGHDLRLLLERNRLLIDAVTPELDYLVARQGKAGIVILGDAQANVLAIEGQKHVLQR 120

Query: 121 EGLRDLHPGSCWSESLRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPRGE 180
           EGLRDLHPGSCWSESLRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPRGE
Sbjct: 121 EGLRDLHPGSCWSESLRGTNAIGTAVVEGRPTLINCGEHYLDRLSPFSCTSVPLRDPRGE 180

Query: 181 VIGVLDITREGVMAQPQDSLSTLMLAAGNIESRLFGLCHPDQLVLAFHSRPQYLNSAWHG 240
           VIGVLDITREGVMAQPQDSLSTLMLAAGNIESRLFGLCHPDQLVLAFHSRPQYLNSAWHG
Sbjct: 181 VIGVLDITREGVMAQPQDSLSTLMLAAGNIESRLFGLCHPDQLVLAFHSRPQYLNSAWHG 240

Query: 241 LLALSLDGEVLAANDGACQLLQVPRHELIGRRSTDLLGERSPAFIARLWQGGVSSVQTAK 300
           LLALSLDGEVLAANDGACQLLQVPRHELIGRRSTDLLGERSPAFIARLWQGGVSSVQTAK
Sbjct: 241 LLALSLDGEVLAANDGACQLLQVPRHELIGRRSTDLLGERSPAFIARLWQGGVSSVQTAK 300

Query: 301 GEFYFRALQLPRHGRVTPSTPSSKPALSKQSPALDALAGGDQRLARNLRMARQGLGNGLP 360
           GEFYFRALQLPRHGRVTPSTPSSKPALSKQSPALDALAGGDQRLARNLRMARQGLGNGLP
Sbjct: 301 GEFYFRALQLPRHGRVTPSTPSSKPALSKQSPALDALAGGDQRLARNLRMARQGLGNGLP 360

Query: 361 VLLLGETGTGKEVVARALHQASPRADKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRG 420
           VLLLGETGTGKEVVARALHQASPRADKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRG
Sbjct: 361 VLLLGETGTGKEVVARALHQASPRADKPFVAVNCAAIPEGLIESELFGYREGAFTGSRRG 420

Query: 421 GMVGRLMQAHGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAGDEQDIDVALICATHR 480
           GMVGRLMQAHGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAGDEQDIDVALICATHR
Sbjct: 421 GMVGRLMQAHGGTLFLDEIGDMPLALQARLLRVLQERRVAPLGAGDEQDIDVALICATHR 480

Query: 481 DLKRLVQEQHFREDLFYRVNGVSLRLPALRERDDLAAIIQGLLDKADARGVTLDPALTAL 540
           DLKRLVQEQHFREDLFYRVNGVSLRLPALRERDDLAAIIQGLLDKADARGVTLDPALTAL
Sbjct: 481 DLKRLVQEQHFREDLFYRVNGVSLRLPALRERDDLAAIIQGLLDKADARGVTLDPALTAL 540

Query: 541 LEGFDWPGNIRQLEMVVRTALAMREDGEQVLTLDHLTDCLLDELASSAAPSGSLKDSELE 600
           LEGFDWPGNIRQLEMVVRTALAMREDGEQVLTLDHLTDCLLDELASSAAPSGSLKDSELE
Sbjct: 541 LEGFDWPGNIRQLEMVVRTALAMREDGEQVLTLDHLTDCLLDELASSAAPSGSLKDSELE 600

Query: 601 QIRGALARHQGNVSAAAAALGISRATLYRKLKQLRG 636
           QIRGALARHQGNVSAAAAALGISRATLYRKLKQLRG
Sbjct: 601 QIRGALARHQGNVSAAAAALGISRATLYRKLKQLRG 636