Pairwise Alignments

Query, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

Subject, 559 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  222 bits (566), Expect = 3e-62
 Identities = 154/505 (30%), Positives = 240/505 (47%), Gaps = 26/505 (5%)

Query: 59  ARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGC 118
           A  L  LG+  GDR+    PNC ++ I   A  + G ILVN+NP Y   EL++ L  SG 
Sbjct: 63  AAYLQGLGLVKGDRVAAMMPNCPQYPIAVAAILRAGLILVNVNPLYTPRELEHQLKDSGA 122

Query: 119 RWVICADAFKTSDYHAMLQGLLPGLASSQPGALICERFPELRG-----VVSLALSPPPGF 173
           + +I  + F T+    +    +  +  +  G    +R   L+G     VV       P F
Sbjct: 123 KAIIIMENFGTTLQQCIASTPIKHIVLASMG----DRLGFLKGALVNYVVRNVKKLVPHF 178

Query: 174 LAWHALQARAEVVSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMV 233
               A++    +  G + + +   +  DD   +QYT GTTG  KGA L H N++ N   V
Sbjct: 179 SLPGAVRFNDALDKGASGSVKPVAIGPDDVAVLQYTGGTTGVSKGAVLLHRNVIAN---V 235

Query: 234 GESLGLTEHDRLVVP----------VPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLAT 283
            +S    E     VP          +PLYH F   +  +  M  G  LI   +  D  A 
Sbjct: 236 LQSEAWNEPAMAKVPANEQPTGVCALPLYHIFAFTVGMMLSMRTGGKLILIPNPRDIPAV 295

Query: 284 LRAVAQEKATALYGVPTMFIAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRRVIGEMHM 343
           L+ +++    +   V T+F    +HP     +  +L+  +  G      V +  + E   
Sbjct: 296 LKELSKHTIHSFPAVNTLFNGLANHPDFNTVNWKNLKISVGGGMAVQAAVAKLWL-EKTG 354

Query: 344 AEVQIAYGMTETSPVSLQTGAADDLERRVTSVGRTQPRLESKVVDAEGNTVPRGEIGELC 403
             +   YG++ETSP +  T    +      ++G   P    K++D EGN VP GE GE+ 
Sbjct: 355 CPICEGYGLSETSPST--TCNPTNSTAYTGTIGLPLPGTWLKLLDDEGNEVPLGERGEIA 412

Query: 404 TRGYSVMLGYWNNPKATAESIDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYP 463
            +G  VM GYW  P  TA+ +  +G+  +GD+ V+DE+GY ++V R KDMI+  G N+YP
Sbjct: 413 IKGPQVMAGYWQRPDETAKVMTPDGYFKSGDIGVVDERGYFKVVDRKKDMILVSGFNVYP 472

Query: 464 RELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHAVSEVELREWARARIAHFKV 523
            E+E+     P V +   +GVP  K G E V  V +    +++E ++RE+ RA +  +K 
Sbjct: 473 NEVEDVVALIPGVLECAAVGVPDEKTG-EAVKLVIVKKDPSLTEAQVREYCRANLTGYKQ 531

Query: 524 PRYFRFVDEFPMTVTGKVQKFRMRE 548
           PR   F  E P T  GK+ +  +R+
Sbjct: 532 PRIVEFRTEMPKTPVGKILRRELRD 556