Pairwise Alignments

Query, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

Subject, 575 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  252 bits (643), Expect = 3e-71
 Identities = 188/550 (34%), Positives = 276/550 (50%), Gaps = 31/550 (5%)

Query: 12  DKPLLTQCIGDAFDATVARFPDREALVVHHQALRYTWRQLADAVDQHARALMALGVQPGD 71
           D  L  + +    D  VAR+P+  A+    Q +  T+RQL  AV++ A+ L  LGV+PG 
Sbjct: 27  DAELPVKPVQQMLDEAVARWPEHSAVEFMGQVI--TYRQLGAAVERAAKGLQDLGVKPGV 84

Query: 72  RLGIWAPNCAEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGCRWVICADAFKTSD 131
            +G++ PN   + I  FA  K G  +VN +P      L + +  S    +I  D      
Sbjct: 85  HVGLYLPNTPHYPIAFFAVLKAGGTVVNYSPLDAERVLAHKIEDSRTDILITLDLVNLYP 144

Query: 132 YHAML------QGLLPGLASSQPGALICERFPELRGVVSLALSPPPGFLAWHALQARAEV 185
             A L      + L+ G      GA   +   +L+G   +A  P         L+    +
Sbjct: 145 QMARLLDSSRLRKLVVGSLGDY-GAAGDKVQAQLQGAGQIAPVPTDD----RHLRFTDLL 199

Query: 186 VSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYMVGESLG-----LT 240
            S             ++ + +QYT GTTG PKGA L+H+N+ +      ES       L 
Sbjct: 200 KSEGTHQTHPLGDLTEEIVVLQYTGGTTGLPKGAMLTHANLTSASAQYYESTKGDPPILD 259

Query: 241 E-HDRLVVPVPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEKATALYGVP 299
           E  +R +V +PL+H F +  A L  +  G+AL+  +  FD  A +  +A  + +   GVP
Sbjct: 260 EGSERFLVVLPLFHIFALSAAMLLGVRLGAALVLHT-RFDVDAVMNELAASRISVFPGVP 318

Query: 300 TMFIAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRR--VIGEMHMAEVQIAYGMTETSP 357
           TM+ A L HP+  E DL SL+     GA  P+EV +R   +   H+ E    +GMTETSP
Sbjct: 319 TMYTAILSHPKAKEMDLRSLKFCGSGGAPLPVEVEQRFFALTGCHLNE---GWGMTETSP 375

Query: 358 VSLQTGAADDLERRVTSVGRTQPRLESKVV---DAEGNTVPRGEIGELCTRGYSVMLGYW 414
           V   T A     R+  S G   P++  K+V   D   +    GE GELC +G +VM GYW
Sbjct: 376 VGTFTPARG--VRKAGSCGMPLPQVRIKLVSLDDPSKDVTAFGEAGELCIKGPNVMKGYW 433

Query: 415 NNPKATAESIDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHP 474
           NNPKATAES+  +G+  +GD+A MD  GY  IV R+KDM++ GG N+YPR LEE  + HP
Sbjct: 434 NNPKATAESMTPDGYFRSGDVAKMDADGYFYIVDRTKDMLLCGGYNVYPRVLEEAVYEHP 493

Query: 475 AVADVQVIGVPCSKYGEEIVAWVRLHPGHAVSEVE-LREWARARIAHFKVPRYFRFVDEF 533
           AVA+V VIG+P    G+   A+V+L  G     ++ L+ + + R+   ++        E 
Sbjct: 494 AVAEVCVIGIPDEYRGQSPKAFVKLKEGAGELTLDALKAFLKDRLGKHEMIGALEIRAEL 553

Query: 534 PMTVTGKVQK 543
           P T  GK+ K
Sbjct: 554 PKTAVGKLSK 563