Pairwise Alignments

Query, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

Subject, 519 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Variovorax sp. SCN45

 Score =  244 bits (623), Expect = 6e-69
 Identities = 170/510 (33%), Positives = 242/510 (47%), Gaps = 33/510 (6%)

Query: 45  RYTWRQLADAVDQHARALMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAY 104
           R  +    D V +    L  LG++PGDR+G+ + N   +    F +   G ++  +N  +
Sbjct: 26  RLDFAGFTDRVARLGAVLRQLGMRPGDRVGMMSLNSHRFVEYFFGTWWGGGVINPVNIRW 85

Query: 105 RSSELDYALGQSGCRWVICADAFKTSDYHAMLQGLLPGLASSQPGALICERFPELRGVVS 164
              E+ Y+L     R ++  D F      A +   L GL+SS    + C       G V 
Sbjct: 86  NPKEVAYSLDDCDTRILLVDDVF------APMAAELRGLSSSLRTVVYCGD-----GAV- 133

Query: 165 LALSPPPGFLAWHALQARAEVVSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLSHS 224
                P G + + AL A  +        A  A    D+   + YT GTTG PKG  L+H 
Sbjct: 134 -----PEGMVGYEALLAATD-------PAEDAPHDSDELAAVMYTGGTTGQPKGVMLTHG 181

Query: 225 NILNNGYMVGESLGLTEHDRL-VVPVPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLAT 283
           ++  N      +L     D   +V  P++H  G  +A    M      + P   FD LA 
Sbjct: 182 SLCINALGTVAALPRDTQDAAAIVAAPMFHVAGCGVALQSLMRLVPVHVVP--VFDELAV 239

Query: 284 LRAVAQEKATALYGVPTMFIAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRRVIGEMHM 343
           LR +   + T ++ VPTM    ++HP+  EFDLSSLR      A     ++ + +     
Sbjct: 240 LRTLQSARITEMFLVPTMIKRVIEHPRFAEFDLSSLRLLSYGAAPIDAALLDQAMRAFPG 299

Query: 344 AEVQIAYGMTETSPV-----SLQTGAADDLERRVTSVGRTQPRLESKVVDAEGNTVPRGE 398
                 YGMTE SPV     S       D ER + S G   P  E ++VD + N VP G+
Sbjct: 300 TAFAQVYGMTELSPVVTALPSHCHAPGPDRERLLRSAGTPIPIAELRIVDGDDNEVPFGQ 359

Query: 399 IGELCTRGYSVMLGYWNNPKATAESIDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGG 458
           +GE+  RG  VM GYWN PK T  ++   GWMHTGD   MDE+G+V +V R KDMI+ GG
Sbjct: 360 VGEIVARGPMVMKGYWNKPKETEAALRG-GWMHTGDGGYMDEEGFVFVVDRMKDMIVSGG 418

Query: 459 ENIYPRELEEFFFTHPAVADVQVIGVPCSKYGEEIVAWVRLHPGHAVSEVELREWARARI 518
           EN+Y  E+E      P V    VIGVP  K+GE + A +    G A+    +    R +I
Sbjct: 419 ENVYSAEVENAIAQLPQVLMSAVIGVPDDKWGERVHAVIVRREGMALEAEAVIAHCREQI 478

Query: 519 AHFKVPRYFRFVDEFPMTVTGKVQKFRMRE 548
           A +K PR   F D  P++  GK+QKF++RE
Sbjct: 479 AGYKCPRSVEFRDALPLSAAGKLQKFQLRE 508