Pairwise Alignments

Query, 562 a.a., Butyrate--CoA ligase from Pseudomonas putida KT2440

Subject, 538 a.a., Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) from Sphingobium sp. HT1-2

 Score =  228 bits (580), Expect = 6e-64
 Identities = 168/551 (30%), Positives = 260/551 (47%), Gaps = 53/551 (9%)

Query: 2   PQPSYTQGTQDKPLLTQCIGDAFDATVARFPDREALVVHHQALRYTWRQLADAVDQHARA 61
           P P  T G     L    +GD    +  RFPD+ A++   + +  T+ QL +  ++ A  
Sbjct: 29  PSPEVTGG-----LGRIALGDLLRRSARRFPDKAAVITPSRTI--TFGQLDEMANRCANM 81

Query: 62  LMALGVQPGDRLGIWAPNCAEWCITQFASAKVGAILVNINPAYRSSELDYALGQSGCRWV 121
           L   G +PGDR+     N  ++ I  F   K G + V INP   + +  Y L  +   +V
Sbjct: 82  LRNEGAKPGDRIATICSNSIDFIIVIFGLHKAGLVWVPINPLIAADDRAYILNHTEASFV 141

Query: 122 ICADAFKTSDYHAMLQGLLP-GLASSQPGALICERFPELRGVVSLALSPPPGFLAWHALQ 180
           I       +D H  +Q ++P G   S P   + E F         + SP    L  H   
Sbjct: 142 I-------ADEH--IQNVIPEGAGGSPPVLALGEAFDTRLS----SASPKEPDLPIHER- 187

Query: 181 ARAEVVSGEALAARQAQLRCDDPINIQYTSGTTGFPKGATLSHSNILNNGYM---VGESL 237
                                D   I YTSGTT  PKG  + H N+     +   +GE +
Sbjct: 188 ---------------------DLAMIMYTSGTTSRPKG--VMHCNLAVYATVMCNIGEWM 224

Query: 238 GLTEHDRLVVPVPLYHCFGMVMANLGCMTHGSALIYPSDAFDPLATLRAVAQEKATALYG 297
            +T  DR+++ +PL+H     +         + +++  + FDP     A+  EK +   G
Sbjct: 225 -VTRKDRILIVLPLFHVSAHCLFTTFMAAGATVVLH--NGFDPGQVAAAIEDEKVSFFVG 281

Query: 298 VPTMFIAELDHPQRGEFDLSSLRTGIMAGATCPIEVMRRVIGEMHMAEVQIAYGMTETSP 357
           +P M+ A +DHP R   D SSLR  I A A  P  ++RR++ E     V ++ G TE  P
Sbjct: 282 LPMMYAAVMDHPIRMTTDFSSLRYCIYAMAPMPGPLLRRLLSEFCPTFV-LSSGQTEMYP 340

Query: 358 VSLQTGAADDLERRVTSVGRTQPRLESKVVDAEGNTVPRGEIGELCTRGYSVMLGYWNNP 417
            +        L +     G      +  ++D +G  +P G++GE+  RG +VMLGY+ + 
Sbjct: 341 STAMLRPEQQLLKEGNYWGEPSIVNDMAIMDDDGTLLPPGQVGEIVHRGPNVMLGYYKDE 400

Query: 418 KATAESIDAEGWMHTGDLAVMDEQGYVRIVGRSKDMIIRGGENIYPRELEEFFFTHPAVA 477
            ATA S    GW HTGDL V+DE G +  V R KD+I  GGEN+   ++E+    HP++ 
Sbjct: 401 AATAHS-RRFGWHHTGDLGVIDEDGQLLFVDRLKDIIKSGGENVASVKVEQVLLQHPSIG 459

Query: 478 DVQVIGVPCSKYGEEIVAWVRLHPGHAVSEVELREWARARIAHFKVPRYFRFVDEFPMTV 537
           +   IGVP  ++ E +VA V L PG      E+ +  RA +A  +VP+  +FVD+ P+T 
Sbjct: 460 NAAAIGVPHPRWQEAVVAVVMLKPGSTAGAQEILDHCRAALAPHEVPKAVQFVDDLPLTA 519

Query: 538 TGKVQKFRMRE 548
           T K++K  +R+
Sbjct: 520 TSKLRKVELRD 530