Pairwise Alignments

Query, 1042 a.a., Multidrug resistance protein MexB from Pseudomonas putida KT2440

Subject, 1053 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score = 1068 bits (2762), Expect = 0.0
 Identities = 552/1054 (52%), Positives = 745/1054 (70%), Gaps = 15/1054 (1%)

Query: 1    MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPNVAPPQVEIYAVYPGASAATMDES 60
            M +FFIDRP+FAWV+AL I+L GAL+I +LP+ QYP +AP  ++I   YPGASA T+ ++
Sbjct: 1    MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPAIAPTAIDIQVTYPGASAQTVQDT 60

Query: 61   VVSLIEQELNGADNLLYFESQS-SLGSATITATFAPGTHPDLAQVDVQNRLKVVESRLPR 119
            VV +IEQ+LNG DNL Y  S S S GS TIT TF  GT+PD+AQV VQN+L +    LP+
Sbjct: 61   VVQVIEQQLNGIDNLRYVSSDSNSDGSMTITVTFNQGTNPDIAQVQVQNKLNLATPLLPQ 120

Query: 120  PVTQQGLQVEKVSTGFLLLATLTSEDGKLDETALSDILARNVMDEIRRLKGVGKAQLYGS 179
             V QQG++V K    FL++  L SEDG + +  LS+ +  N+ D I R  GVG  Q++GS
Sbjct: 121  EVQQQGIRVTKSVKNFLMVIGLVSEDGSMTKDDLSNYIVSNIQDPISRTAGVGDFQVFGS 180

Query: 180  ERAMRIWIDPRKLIGFNLTPNDVAEAIAAQNAQVAPGSIGDLPSRSTQEITANVVVKGQL 239
            + AMRIW+DP KL  + LTP DV+ AI+AQN QVA G +G LP+    ++ A ++ K +L
Sbjct: 181  QYAMRIWLDPSKLNNYQLTPVDVSTAISAQNVQVATGQLGGLPALPGTQLNATIIGKTRL 240

Query: 240  SSPDEFAAIVLRANPDGSTVTIGDVARVEIGAQEYQYGTRLNGKPATAFSVQLSPGANAM 299
             + ++F  I+++ N DGS V + DVAR+E+G Q Y    + NGKPA+  +++L+ GANA+
Sbjct: 241  QTAEQFGNILMKVNTDGSQVRLKDVARIELGGQNYSIAAQFNGKPASGMAIKLASGANAL 300

Query: 300  ETATLVRAKMQDLARYFPEGVKYDIPYDTSPFVKVSIEQVINTLFEAMLLVFAVMFLFLQ 359
            +T   +RA +  L  +FP G+K  +PYDT+P V  SI  V++TL EA++LVF VMFLFLQ
Sbjct: 301  DTGKAIRATVAQLEPFFPPGMKAVVPYDTTPVVTESISGVVHTLVEAIVLVFLVMFLFLQ 360

Query: 360  NLRYTLIPTLVVPVALMGTFAVMLAMGFSVNVLTLFGMVLAIGILVDDAIVVVENVERIM 419
            N R T+I T+ VPV L+GTF ++ A GF++N LT+FGM+LAIG+LVDDAIVVVENVER+M
Sbjct: 361  NFRATIITTMTVPVVLLGTFGILAAFGFTINTLTMFGMILAIGLLVDDAIVVVENVERVM 420

Query: 420  AEEGLPPKQATRKAMGQISGAIVGITLVLVAVFLPMAFMQGSVGVIYQQFSLSMAVSILF 479
            AEE L PK+AT K+MGQI GA+VGI LVL AV LPMAF  GS GVIY+QFS+++  ++  
Sbjct: 421  AEEHLSPKEATVKSMGQIQGALVGIALVLSAVLLPMAFFGGSTGVIYKQFSITIVSAMAL 480

Query: 480  SAFLALSLTPALCATLLKPVAKGEHHE-RKGFFGWFNRRFESMSNGYQRWVVQALKRSGR 538
            S  +AL  TPALCAT+LKP+   +H + ++GFFGWFNR F+     Y+R V   +K    
Sbjct: 481  SVLVALIFTPALCATMLKPIDPEKHGQPKRGFFGWFNRTFDRGVLSYERGVGNMIKHKIP 540

Query: 539  YLLVYAVLLAVLGYGFSQLPTAFLPTEDQGYTITDIQLPPGASRMRTEQVAAQI------ 592
              LVYA+++A + + F ++P AFLP EDQG     +Q P G++  RT++V   +      
Sbjct: 541  AFLVYALVIAGMIWLFMRIPAAFLPDEDQGVIFAQVQTPVGSTAERTQKVIDDMRIFLLN 600

Query: 593  --EAHNAEEPGVGNTTLILGFSFSGSGQNAALAFTTLKDWSERGADDSAQSIADRATMAF 650
              E    E  GV +   + GF+F+G GQ++ LAF  LK W ER A  S   IA RA   F
Sbjct: 601  DKEGEPGEGKGVKSVFTVNGFNFAGRGQSSGLAFVMLKPWDERDASTSVFEIAKRAQGYF 660

Query: 651  TQ-LKDAIAYSVLPPPIDGLGESTGFEFRLQDRGGMGHAELMAARDQLLESASKSKVLTN 709
             Q  KDA+ ++++PP +  LG +TGF+  LQD+GG+GH +LMAAR+Q L  A++SK+L  
Sbjct: 661  MQTFKDAMVFAIVPPSVLELGNATGFDVFLQDQGGVGHDKLMAARNQFLGMAAQSKILAG 720

Query: 710  VREASLAESPQVQLEIDRRQANALGVSFADIGTVLDVAVGSSYVNDFPNQGRMQRVVVQA 769
            VR   + + PQ +L +D  +A+A G++ + I   L +A+G SYVNDF ++GR+++V VQ 
Sbjct: 721  VRPNGVNDEPQYELTVDDEKASAQGITLSSINQTLAIALGGSYVNDFIDRGRVKKVYVQG 780

Query: 770  EGDQRSQVEDLLNIHVRNDSGKMVPLGAFVQARWVSGPVQLTRYNGYPAVSISGEPAAGY 829
            E   R   EDL   +VR+DSGKMVPL A    +W+ G  +L+RYNG  A+ I G PA GY
Sbjct: 781  EAASRMSPEDLNKWYVRSDSGKMVPLSAIASGKWIFGSPKLSRYNGVAAMEILGTPAPGY 840

Query: 830  SSGEAMAEVERLVAQLPAGTGLEWTGLSLQERLSGSQAPLLMALSLLVVFLCLAALYESW 889
            S+G+AMAEVER+  QLPAG G  WTGLS +ERLSGSQAP L ALSLLVVFLCLAALYESW
Sbjct: 841  STGDAMAEVERIAKQLPAGIGYAWTGLSYEERLSGSQAPALYALSLLVVFLCLAALYESW 900

Query: 890  SIPTAVLLVVPLGVLGAVLAVTLRGMPNDVFFKVGLITLIGLSAKNAILIIEFAKHLVDQ 949
            SIP AV+LVVPLGV+GA++A ++RG+ NDVFF+VGL+  +GL+AKNAILI+EFAK L +Q
Sbjct: 901  SIPIAVILVVPLGVVGALIATSMRGLSNDVFFQVGLLVTVGLAAKNAILIVEFAKELHEQ 960

Query: 950  GVDAADAAVQAARLRLRPIVMTSLAFILGVVPLAIASGASSASQQAIGTGVIGGMLSAT- 1008
            G    +AA++A+R+RLRPI+MTS+AFILGV+PLAI+SGA S SQ AIGTGVIGGM++AT 
Sbjct: 961  GKGIVEAAIEASRMRLRPIIMTSMAFILGVLPLAISSGAGSGSQHAIGTGVIGGMITATV 1020

Query: 1009 LAVVFVPVFFVVVMRLSGRRQAHDSDGQPVPRES 1042
            LA+ +VP+FF  V     R++   +D    P+E+
Sbjct: 1021 LAIFWVPLFFATVSAAGERKK---TDTTETPKEA 1051