Pairwise Alignments

Query, 1042 a.a., Multidrug resistance protein MexB from Pseudomonas putida KT2440

Subject, 1032 a.a., Multidrug-efflux transporter MexB from Alteromonas macleodii MIT1002

 Score = 1025 bits (2649), Expect = 0.0
 Identities = 529/1030 (51%), Positives = 712/1030 (69%), Gaps = 4/1030 (0%)

Query: 1    MPQFFIDRPVFAWVVALFILLAGALAIPQLPVAQYPNVAPPQVEIYAVYPGASAATMDES 60
            M +FFIDRPVFAWV+A+  ++AG LAI  LP+ QYP VAPP V I A YPGASA T++ S
Sbjct: 1    MARFFIDRPVFAWVLAIITMMAGVLAITSLPIEQYPKVAPPSVTISATYPGASAETVENS 60

Query: 61   VVSLIEQELNGADNLLYFESQSSLGSATITATFAPGTHPDLAQVDVQNRLKVVESRLPRP 120
            V  +IEQ L G DNL YF + SS  S +IT TF PG  PD+AQV  QN+++     LP  
Sbjct: 61   VTQVIEQSLTGIDNLRYFSASSSNSSMSITLTFEPGADPDIAQVQTQNKVQGALPLLPTQ 120

Query: 121  VTQQGLQVEKVSTGFLLLATLTSEDGKLDETALSDILARNVMDEIRRLKGVGKAQLYGSE 180
            V QQG+ V K ++ F L     SED  + +  LSD+L     D I R+ GVG  +++G++
Sbjct: 121  VQQQGVTVTKANSAFALAVGFYSEDDSMTQYDLSDLLVSQFRDPISRVNGVGNVRVFGAQ 180

Query: 181  RAMRIWIDPRKLIGFNLTPNDVAEAIAAQNAQVAPGSIGDLPSRSTQEITANVVVKGQLS 240
            R+MRIW+DP KL  +NLTP DV  A+  QN  V+ G +G +P+   Q+I A +  + +L 
Sbjct: 181  RSMRIWLDPDKLYSYNLTPTDVQGAVQVQNTDVSAGQLGGMPAIENQQINATIQAQSRLQ 240

Query: 241  SPDEFAAIVLRANPDGSTVTIGDVARVEIGAQEYQYGTRLNGKPATAFSVQLSPGANAME 300
            + ++F  IVLR N DGS V + DVARVE+GAQ Y    R + KPA+  ++ L+ GANA++
Sbjct: 241  TVEDFENIVLRVNTDGSQVRVRDVARVELGAQSYDVIVRYDRKPASGMAISLASGANALD 300

Query: 301  TATLVRAKMQDLARYFPEGVKYDIPYDTSPFVKVSIEQVINTLFEAMLLVFAVMFLFLQN 360
            T   V+A++++L    P+ VK   P D+SPF+++SIE V++TL EA++LVF VM LFLQN
Sbjct: 301  TIKAVKARVEELRSNLPDTVKVVYPVDSSPFIELSIESVVHTLIEAVVLVFLVMLLFLQN 360

Query: 361  LRYTLIPTLVVPVALMGTFAVMLAMGFSVNVLTLFGMVLAIGILVDDAIVVVENVERIMA 420
             R TLIPT+ VPV L+GTFAV+LA GFS+NVLT+F MVLAIG+LVDDAIVVVENVERIM 
Sbjct: 361  WRATLIPTIAVPVVLLGTFAVLLAFGFSINVLTMFAMVLAIGLLVDDAIVVVENVERIME 420

Query: 421  EEGLPPKQATRKAMGQISGAIVGITLVLVAVFLPMAFMQGSVGVIYQQFSLSMAVSILFS 480
            EEGL P +AT+K+M QI+GA+VGI  VL  VF+PMAF  GS G IY+QFS+++  ++ FS
Sbjct: 421  EEGLSPAEATKKSMTQITGALVGIAAVLSTVFIPMAFFSGSAGAIYRQFSVTIVSAMAFS 480

Query: 481  AFLALSLTPALCATLLKPVAKGEHHERKGFFGWFNRRFESMSNGYQRWVVQALKRSGRYL 540
              +A+ L+P+LCATLLK   +  H + KGFFGWFNR F    + YQ+      +R  RY 
Sbjct: 481  VLVAIILSPSLCATLLKKHPE-NHDKNKGFFGWFNRTFNKGRDRYQKTTTHMAQRFKRYF 539

Query: 541  LVYAVLLAVLGYGFSQLPTAFLPTEDQGYTITDIQLPPGASRMRTEQVAAQIEAH--NAE 598
            +VY +L+  + + FSQLP AFLP EDQG  +  +  PPGA+  RT +   Q+E +    E
Sbjct: 540  VVYGLLVGGMAFIFSQLPGAFLPDEDQGRMMVLVSTPPGATAGRTLESIKQVEDYILEQE 599

Query: 599  EPGVGNTTLILGFSFSGSGQNAALAFTTLKDWSERGADDSAQSIADRATMAFTQLKDAIA 658
            +  V     ++GFSF+G  QNA +AF    DWS R  ++SA ++ +RA  AF+Q++DA A
Sbjct: 600  QDAVNGMFAVVGFSFAGQAQNAGMAFLNFNDWSVRDENNSAFAVMNRAFGAFSQIQDASA 659

Query: 659  YSVLPPPIDGLGESTGFEFRLQDRGGMGHAELMAARDQLLESASKSKVLTNVREASLAES 718
            + ++PPPI  LG +TGF+ +L DRGG GH  LM AR+QLL  A+++  L  VR   L++ 
Sbjct: 660  FPIVPPPIMELGNATGFDMQLVDRGGNGHEALMNARNQLLGMAAQNPKLAGVRPNGLSDV 719

Query: 719  PQVQLEIDRRQANALGVSFADIGTVLDVAVGSSYVNDFPNQGRMQRVVVQAEGDQRSQVE 778
            PQ ++ ID  +A+ALG++ ++I   L +A GSSYVNDF ++GR++RV +QA+   R   E
Sbjct: 720  PQFKINIDSEKASALGLNLSEINNALQIAWGSSYVNDFIDKGRIKRVYMQADLPHRMTPE 779

Query: 779  DLLNIHVRNDSGKMVPLGAFVQARWVSGPVQLTRYNGYPAVSISGEPAAGYSSGEAMAEV 838
            DL    VRN  G+MV    F    WV G  +L R+NG  +V+I G  A G SSGEAMAE+
Sbjct: 780  DLDKWFVRNSEGEMVAFNTFSTTEWVYGSPKLERFNGVSSVNIQGSAAEGISSGEAMAEM 839

Query: 839  ERLVAQLPAGTGLEWTGLSLQERLSGSQAPLLMALSLLVVFLCLAALYESWSIPTAVLLV 898
            ++LV QLP G  +EW+GLS +E+ +GSQAP+L ALS+L+VFLCLAALYESWS+P AV+LV
Sbjct: 840  QKLVEQLPPGFAIEWSGLSYEEQEAGSQAPMLYALSILIVFLCLAALYESWSVPFAVMLV 899

Query: 899  VPLGVLGAVLAVTLRGMPNDVFFKVGLITLIGLSAKNAILIIEFAKHLVDQGVDAADAAV 958
            VPLG+LG+V A  +  +PNDV+ +V  +T +GL+AKNAILI+EFAK   + G D   A  
Sbjct: 900  VPLGILGSVTAAFIFNLPNDVYLQVAFLTTVGLAAKNAILIVEFAKEQYENGEDLMTAVS 959

Query: 959  QAARLRLRPIVMTSLAFILGVVPLAIASGASSASQQAIGTGVIGGMLSAT-LAVVFVPVF 1017
             AA  R RPI+MTS+AFILGV PLA+ASGA +ASQ AIG  V+GGM +AT LA+ FVP+F
Sbjct: 960  NAASQRFRPILMTSMAFILGVTPLALASGAGAASQNAIGIAVMGGMFAATFLAIFFVPMF 1019

Query: 1018 FVVVMRLSGR 1027
            +V+V +L  R
Sbjct: 1020 YVLVEKLFHR 1029