Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 394 a.a., hemolysin D from Pseudomonas simiae WCS417

 Score =  288 bits (736), Expect = 2e-82
 Identities = 164/372 (44%), Positives = 238/372 (63%), Gaps = 3/372 (0%)

Query: 15  MALLSLSLAGCSDSAEPDEQAPTAQVRVETLQLQPLAISSELSGRILAPRTAEVRARVAG 74
           ++L+ L++ G     EP  +A T +V V +++ Q   +++EL+GR  A   A++R +V G
Sbjct: 17  LSLIVLAMLGGCSGGEPPPEAVTPKVSVISIKPQSQVLTTELAGRTQAFMVAQIRPQVGG 76

Query: 75  VVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQEQRYRELVD 134
           +V +R++ EG+DVK G  L+ +D A + A    A A+LAK  AT   A+   +R  ELV 
Sbjct: 77  IVQRRLFVEGADVKVGQALYQLDAASYTAALAQAEASLAKYRATLKSAQATARRDAELVK 136

Query: 135 DKAVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIGRAQVTEGAL 194
             A+S+Q+ ++A+A+ L A A+V  A A ++ AR+NL Y  +T+P+ GRI  + VT GAL
Sbjct: 137 INAISQQDNEDAQATLLTAAADVQGAEADVQTARINLAYTRITSPVGGRIETSTVTPGAL 196

Query: 195 VGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQARATLIQDDGSA 254
           V  N+ + L T+QQLDPI+ DVTQST EL  L+R L +G LQ  GDGQAR +L  DDGSA
Sbjct: 197 VVANQDSALTTVQQLDPIYVDVTQSTTELLKLKRDLASGALQSNGDGQARVSLKLDDGSA 256

Query: 255 YPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPKGLSVPQRAI 314
           Y   G+L  S +SV+  T  +TLR+EF NPD  LLPG YVR  LEQA   + + VPQ+A+
Sbjct: 257 YNQQGRLKVSGVSVNEGTGTVTLRAEFANPDHLLLPGMYVRAVLEQARNEQAILVPQKAV 316

Query: 315 LRDSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVVEGLQHVKAGDQV 374
            R ++GV   L+V    +V  R++ +  A G++W V+ GL AG++++VEG Q V+AG  V
Sbjct: 317 NRSASGVTTALLV-VDGKVEQRELTIDRAVGNQWWVTAGLQAGDQLIVEGGQKVRAGAAV 375

Query: 375 QVD--NTPAAPP 384
           QV   N  AA P
Sbjct: 376 QVQEANAQAATP 387