Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

 Score =  291 bits (745), Expect = 2e-83
 Identities = 167/346 (48%), Positives = 223/346 (64%), Gaps = 6/346 (1%)

Query: 18  LSLSLAGCSDSAEPDEQAPTAQ-VRVETLQLQPLAISSELSGRILAPRTAEVRARVAGVV 76
           ++++LAGC  +AE D  A  +  V + TL  + +A+++EL GR+   R AEVRARV G+V
Sbjct: 15  MAIALAGCEPAAEQDGAANASYPVEIVTLAPEQVALAAELPGRVEPMRVAEVRARVPGIV 74

Query: 77  LKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQEQRYRELVDDK 136
           L + + EG+DVK GDVLF IDPAPFKA    A A LA+A+A + +A+ + +RY  LV  +
Sbjct: 75  LHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVKRYEPLVKIE 134

Query: 137 AVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIGRAQVTEGALVG 196
           AVS+Q++D+A A    A A V  A+A ++ ARLNLGYATVTAPISGRIGRA  TEGALVG
Sbjct: 135 AVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRALATEGALVG 194

Query: 197 QNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQARATLIQDDGSAYP 256
           Q E T +A IQQLDPI+ D TQS  +   LR+AL+ G L       ++    Q +G+ + 
Sbjct: 195 QGEATLMARIQQLDPIYIDFTQSAADALRLRQALKDGAL----SADSQRLTAQVEGTDFQ 250

Query: 257 LPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPKGLSVPQRAILR 316
             G+L+F+D+SVD  T Q+ LR  F N D  LLPG YVRVR  Q      + VPQRA+ R
Sbjct: 251 RSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILVPQRAVQR 310

Query: 317 DSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVV 362
            S G  +VLV   +     R V  G  QG RW ++EGL  G++V+V
Sbjct: 311 GSDGQARVLVA-TNGIAEARAVRTGVMQGSRWQITEGLEPGDQVIV 355