Pairwise Alignments

Query, 391 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 379 a.a., RND family efflux transporter, MFP subunit from Enterobacter asburiae PDN3

 Score =  308 bits (790), Expect = 1e-88
 Identities = 170/370 (45%), Positives = 233/370 (62%), Gaps = 7/370 (1%)

Query: 11  PLALMALLSLSLAGCSDSAEPDEQAPTAQVRVETLQLQPLAISSELSGRILAPRTAEVRA 70
           PL+   + ++ L GC       +     QV V  ++  PLA+++EL GR  A R AEVR 
Sbjct: 9   PLSGFIVCAVLLTGCDGQENQQQHLQAPQVSVHIVKSAPLAVTTELPGRTDAFRVAEVRP 68

Query: 71  RVAGVVLKRVYREGSDVKQGDVLFLIDPAPFKADHDSARATLAKAEATRYQARLQEQRYR 130
           +V+G++L+R + EGSDVK G+ L+ IDPA ++A +DSA+  LAKA+A    A L  +RY 
Sbjct: 69  QVSGIILRRNFAEGSDVKAGESLYQIDPATYQAAYDSAKGELAKAQAAANIAHLTVKRYL 128

Query: 131 ELVDDKAVSRQEYDNAKASFLQADAEVAEARAALERARLNLGYATVTAPISGRIGRAQVT 190
            LV  + VS+QEYD A A+  QA+A V  A+A +E AR+NL Y  VT+P+ GRIG++ VT
Sbjct: 129 PLVGTQYVSKQEYDQAVATAQQAEASVVAAKAGVESARINLAYTKVTSPVDGRIGKSSVT 188

Query: 191 EGALVGQNETTPLATIQQLDPIHADVTQSTRELNALRRALRAGELQQVGDGQARATLIQD 250
           EGALV   +   LAT+QQLDPI+ DVTQS+ +   L++        Q GD  +   L+ +
Sbjct: 189 EGALVTNGQAAALATVQQLDPIYVDVTQSSNDFMRLKQT-----SLQKGDTASSVELLME 243

Query: 251 DGSAYPLPGKLLFSDISVDPSTNQITLRSEFPNPDLDLLPGSYVRVRLEQAVQPKGLSVP 310
           +G  YPL G L FSD++VD ST  ITLR+ FPNP   LLPG +VR R+++  QP  + VP
Sbjct: 244 NGQPYPLKGTLQFSDVTVDESTGSITLRAIFPNPQHLLLPGMFVRARIDEGTQPDAILVP 303

Query: 311 QRAILRDSAGVPKVLVVDQHARVSDRQVVLGSAQGDRWIVSEGLAAGERVVVEGLQHVKA 370
           Q+ + R   G   VLVV+   +V  R VV   A GDRW+V+EGL  G+RV+V GLQ V+ 
Sbjct: 304 QQGVTRTPRGDATVLVVNDKNQVEPRTVVAPQAIGDRWLVTEGLKNGDRVIVSGLQKVRP 363

Query: 371 GDQVQVDNTP 380
           G  V V  TP
Sbjct: 364 G--VTVVATP 371