Pairwise Alignments

Query, 363 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 392 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 61/161 (37%), Positives = 88/161 (54%), Gaps = 5/161 (3%)

Query: 196 LSKVLLEQAYVDALTDIPNRRSFMAQADRQLRMATSGQYLAM--IDIDNFKRVNDRFGHD 253
           L +  LE A  DAL+ + NRR F  +A   +   T     A+  IDID+FK +ND FGH 
Sbjct: 214 LVRETLEVADTDALSGLLNRRGFEQRASDLVHGRTGAAPFALLLIDIDHFKAINDTFGHG 273

Query: 254 VGDEVLKRVALHIKTSMADQAF-ARLGGEEFAIFFEGLDQQGAEQRVAALCQRV--REDA 310
           VGD+ ++     ++ ++   A   R+GGEEFAI  E    + A  +  ++   +   +D 
Sbjct: 274 VGDQTIRGFGDMLQHTLPQSALIGRVGGEEFAILLERASPEMARLQAESVRLAIIGHDDQ 333

Query: 311 GEHPVTISIGLAKVDRGESLTTALVRADQALYEAKHTGKDR 351
              P T+SIG+A   R E L   L RAD ALYEAK +G++R
Sbjct: 334 DVPPFTVSIGVALASRDEPLLATLERADAALYEAKRSGRNR 374