Pairwise Alignments

Query, 363 a.a., GGDEF domain protein from Pseudomonas putida KT2440

Subject, 430 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  105 bits (261), Expect = 3e-27
 Identities = 65/171 (38%), Positives = 95/171 (55%), Gaps = 18/171 (10%)

Query: 198 KVLLEQAYVDALTDIPNRRSFMAQADRQLRMATSGQY---LAMIDIDNFKRVNDRFGHDV 254
           K L E A  D LT +PNRRSF  +    + +         +A++DID+FK++ND  GHD 
Sbjct: 249 KRLRELAERDHLTGLPNRRSFFERTRALMDVINDNDESGAVAILDIDHFKKINDTLGHDA 308

Query: 255 GDEVLKRVALHIKTSMADQAF--ARLGGEEFAIFFEGLDQQGAEQRVAALCQRVREDAGE 312
           GD  LK++A  ++    +Q    ARLGGEEFA+F  GLD + A     A C+ +RE   +
Sbjct: 309 GDRALKKLAELLQGMCDEQRHIPARLGGEEFAVFLRGLDARAA----YAFCEELREQVEK 364

Query: 313 H---------PVTISIGLAKVDRGESLTTALVRADQALYEAKHTGKDRFVS 354
           +          +TIS+G+ ++++GE     L  ADQ LY AK  G++R  S
Sbjct: 365 NGRQLSGSSLALTISLGVVEIEKGEPFDNQLNAADQLLYLAKANGRNRVYS 415