Pairwise Alignments

Query, 282 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 273 a.a., AraC family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 89.0 bits (219), Expect = 1e-22
 Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 9/231 (3%)

Query: 32  HSHESFSIGVITGGRSTYINSDQCVEVGAGTTVLMNPGVVHTCNPVAGEPWSYLMLFVDQ 91
           H H++++IG    G  ++      V    GTT++++P   H  +  + E + Y M++V+ 
Sbjct: 35  HRHDTYAIGRTLMGVQSFHYRGDMVHSLPGTTMVLHPDETHDGHAGSDEGFKYRMIYVEP 94

Query: 92  PWLQAV--GFTLP--TQTWSRSPVLYRR---LLQAFADLFDARLPDREARLAALFHELPG 144
             +Q +  G  LP      S  P L+R    LLQ   +  D  L +++A L  L H L  
Sbjct: 95  SLIQQILGGKPLPFIPNGLSTDPRLFRASEVLLQNLENPIDP-LQEQDA-LFDLAHALSN 152

Query: 145 MLGGNASEGGEGNPRLDAAAAFIRAHRSDPLSLEDICGACGLSRSYLIRAFRQRFGLTPH 204
           + G   S         + A  FI +     ++L+++    G  R  L R FR  FG +P+
Sbjct: 153 VSGAIISRKTFDYVAAERAREFIHSALGRSITLDEMANHAGRDRWALSRDFRLLFGTSPY 212

Query: 205 GYLLDQRVQLARAQLRQGRSIAEVAQEAGFADQAHLQRAFKQHLAATPGHY 255
            YL  +R+ L R+ L QG+S+ + A  AGF DQ+H+ R F+      P  +
Sbjct: 213 RYLTMRRLDLVRSLLAQGQSLVDAAMTAGFTDQSHMTRQFRSTYGMPPSRW 263