Pairwise Alignments

Query, 282 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 263 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 72/239 (30%), Positives = 105/239 (43%), Gaps = 9/239 (3%)

Query: 29  YAAHSHESFSIGVITGGRSTYINSDQCVEVGAGTTVLMNPGVVHTCNPVAGEPWSYLMLF 88
           +A HSH+   IGV   G        +  + G G+  L NPG +       G PW ++ L+
Sbjct: 24  FARHSHDECVIGVNLLGEEKVWLDRREFDAGPGSITLYNPGQIQGGGAAEGAPWHFVSLY 83

Query: 89  VDQPWLQAVGFTLPTQTWSRS----PVLYRRLLQAFADLFDARLPDREARLAALFHELPG 144
                L A    L    + RS    P L +RL  A           RE    AL   L  
Sbjct: 84  ATADQL-AADLGLAHLEFDRSLCFQPDLAQRLAAAIKGALSTDTLVRELNEEALVLLLGQ 142

Query: 145 MLGGNA----SEGGEGNPRLDAAAAFIRAHRSDPLSLEDICGACGLSRSYLIRAFRQRFG 200
           ++  +          G P ++ A   + A    PL+L+ +    GLS+ +L+RAF++  G
Sbjct: 143 VVNTSGVRLPGSANTGKPLINRAQELLAAQLHQPLTLDHLGVELGLSKFHLLRAFQKETG 202

Query: 201 LTPHGYLLDQRVQLARAQLRQGRSIAEVAQEAGFADQAHLQRAFKQHLAATPGHYRNAV 259
           LTP  + +  R + A+  LR G   +  A   GFADQ+HL R F+     TPG Y+ AV
Sbjct: 203 LTPREWAMQLRTRRAKGLLRNGVPASAAAHTLGFADQSHLNRHFRAAYGITPGVYQRAV 261