Pairwise Alignments

Query, 282 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 273 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  115 bits (287), Expect = 1e-30
 Identities = 87/268 (32%), Positives = 123/268 (45%), Gaps = 17/268 (6%)

Query: 3   EVSRFWRDPALPFVEARQVGDGRKVCYAAHSHESFSIGVITGGRSTYINSDQCVEVGAGT 62
           E +RFWRD     +E           Y+ H+H++FSIG I  G           + G G 
Sbjct: 7   ETTRFWRDRRFGGMECLSATFLTHE-YSPHAHDTFSIGAIESGSQISTIQGTTEQTGPGH 65

Query: 63  TVLMNPGVVHTCNPVAGEPWSYLMLFVDQPWLQAVGFTLPTQTWSRSPVLYRRL-----L 117
             L+NP  VH   P  G  + Y M++ D   L+ +   +  + +   P   + L     +
Sbjct: 66  LYLINPDEVHDGAP-GGGGYRYRMIYPDAELLRDIIEDVTGRVFHGMPSFPKFLPRDPQM 124

Query: 118 QAFADLFDARLPDREARLAA---LFHELPGMLGGNAS------EGGEGNPRLDAAAAFIR 168
            A   +   RL  +   L A   +F  L  + G + S      E  E     +A      
Sbjct: 125 AASFQMAHRRLEAKTGALEADEGMFSVLAALFGRHGSAIILAVETREKTAVYNARDYLTD 184

Query: 169 AHRSDPLSLEDICGACGLSRSYLIRAFRQRFGLTPHGYLLDQRVQLARAQLRQGRSIAEV 228
            + +D + LE++    GLSR++LIRAFR+ F +TPH YL D R++ AR  LR G   AEV
Sbjct: 185 NYETD-IGLEELASIAGLSRAHLIRAFRKEFHITPHAYLTDVRIRQARRLLRAGEMPAEV 243

Query: 229 AQEAGFADQAHLQRAFKQHLAATPGHYR 256
           A   GFADQAH  R FK     TPG +R
Sbjct: 244 AALCGFADQAHFTRHFKARTGVTPGQFR 271